Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP8P40818 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP8P40818 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP8P40818 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP8P40818 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
USP8P40818 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.8□□□□□ -1.64
USP8P40818 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
USP8P40818 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP8P40818 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 SNORD113.2-201ENST00000364166 89 ntBASIC4.79□□□□□ -1.64
USP8P40818 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 SDHCP2-201ENST00000398565 501 ntBASIC4.79□□□□□ -1.64
USP8P40818 AL355615.1-201ENST00000406187 641 ntBASIC4.79□□□□□ -1.64
USP8P40818 RN7SKP167-201ENST00000411047 285 ntBASIC4.79□□□□□ -1.64
USP8P40818 JKAMPP1-201ENST00000413804 919 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
USP8P40818 BTF3P9-201ENST00000418784 283 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC106883.1-201ENST00000418805 562 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC069213.2-201ENST00000420238 366 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC062016.2-201ENST00000420950 676 ntBASIC4.79□□□□□ -1.64
USP8P40818 MTCO1P43-201ENST00000431831 488 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 RPS6P12-201ENST00000432491 726 ntBASIC4.79□□□□□ -1.64
USP8P40818 ELOCP18-201ENST00000434209 337 ntBASIC4.79□□□□□ -1.64
USP8P40818 MTCYBP29-201ENST00000436327 1006 ntBASIC4.79□□□□□ -1.64
USP8P40818 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 EEF1A1P1-201ENST00000447052 739 ntBASIC4.79□□□□□ -1.64
USP8P40818 HMGB1P26-201ENST00000452520 628 ntBASIC4.79□□□□□ -1.64
USP8P40818 DDX39BP2-208ENST00000453923 258 ntBASIC4.79□□□□□ -1.64
USP8P40818 snoU109.3-201ENST00000459477 145 ntBASIC4.79□□□□□ -1.64
USP8P40818 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 AC090013.1-201ENST00000485147 480 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC231760.1-201ENST00000498002 260 ntBASIC4.79□□□□□ -1.64
USP8P40818 PARP4P3-201ENST00000510265 317 ntBASIC4.79□□□□□ -1.64
USP8P40818 IGKV1-32-201ENST00000519290 311 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC090151.1-201ENST00000520784 730 ntBASIC4.79□□□□□ -1.64
USP8P40818 OR7E13P-201ENST00000526052 910 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.79□□□□□ -1.64
USP8P40818 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 AP000916.1-201ENST00000533869 835 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC087894.1-201ENST00000538359 518 ntBASIC4.79□□□□□ -1.64
USP8P40818 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.79□□□□□ -1.64
USP8P40818 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 AP000919.1-202ENST00000581139 1264 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 AC100847.1-201ENST00000611316 481 ntBASIC4.79□□□□□ -1.64
USP8P40818 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 AL035461.2-201ENST00000619201 524 ntBASIC4.79□□□□□ -1.64
USP8P40818 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.79□□□□□ -1.64
USP8P40818 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.79□□□□□ -1.64
USP8P40818 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USP8P40818 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.79□□□□□ -1.64
USP8P40818 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
USP8P40818 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 AC134882.1-201ENST00000603738 1676 ntBASIC4.79□□□□□ -1.64
USP8P40818 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP8P40818 CYP1D1P-201ENST00000416662 1433 ntBASIC4.79□□□□□ -1.64
USP8P40818 AC016588.2-201ENST00000632484 3021 ntBASIC4.78□□□□□ -1.64
USP8P40818 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP8P40818 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP8P40818 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP8P40818 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.78□□□□□ -1.64
USP8P40818 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 SNORA70F-201ENST00000384142 135 ntBASIC4.78□□□□□ -1.64
USP8P40818 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP8P40818 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 UQCRBP1-201ENST00000421129 336 ntBASIC4.78□□□□□ -1.64
USP8P40818 RPL7AP25-201ENST00000423357 805 ntBASIC4.78□□□□□ -1.64
USP8P40818 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.78□□□□□ -1.64
USP8P40818 CDY14P-201ENST00000431260 1014 ntBASIC4.78□□□□□ -1.64
USP8P40818 MTND1P26-201ENST00000440488 538 ntBASIC4.78□□□□□ -1.64
USP8P40818 CDY12P-201ENST00000440679 1015 ntBASIC4.78□□□□□ -1.64
USP8P40818 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 CDY13P-201ENST00000445813 1015 ntBASIC4.78□□□□□ -1.64
USP8P40818 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 AC073264.2-201ENST00000448886 166 ntBASIC4.78□□□□□ -1.64
USP8P40818 AL162591.2-201ENST00000449634 317 ntBASIC4.78□□□□□ -1.64
USP8P40818 AL009048.1-201ENST00000450437 298 ntBASIC4.78□□□□□ -1.64
USP8P40818 CDY23P-201ENST00000451661 1014 ntBASIC4.78□□□□□ -1.64
USP8P40818 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.78□□□□□ -1.64
USP8P40818 DUXAP8-207ENST00000456786 622 ntBASIC4.78□□□□□ -1.64
USP8P40818 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.78□□□□□ -1.64
USP8P40818 RPL23AP72-201ENST00000492447 435 ntBASIC4.78□□□□□ -1.64
USP8P40818 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP8P40818 SNORA19.3-201ENST00000516165 130 ntBASIC4.78□□□□□ -1.64
USP8P40818 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms