Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHMT2P34897 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 RN7SKP227-201ENST00000364445 330 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHMT2P34897 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 ZNF603P-201ENST00000405613 487 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
SHMT2P34897 AC092647.1-201ENST00000420654 287 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 OR6K4P-201ENST00000423179 955 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 GSTA7P-201ENST00000438425 448 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC245517.2-201ENST00000442890 346 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 RPL38P1-201ENST00000460914 211 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 RPS7P7-201ENST00000463499 571 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 RPL7P1-201ENST00000468161 747 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 RPL7P9-201ENST00000468715 747 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 SYT14P1-201ENST00000481459 721 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC068587.1-201ENST00000483613 781 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC090543.1-201ENST00000492168 485 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC108157.1-201ENST00000510511 539 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 HMGB1P47-201ENST00000511281 589 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 TOMM20P2-201ENST00000540082 421 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 AL591034.3-201ENST00000605511 685 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 OR6R2P-201ENST00000609216 300 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.02□□□□□ -1.77
SHMT2P34897 AC016717.3-201ENST00000624730 554 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AP005264.7-201ENST00000625003 745 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 CASC19-284ENST00000642142 1868 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 AC116667.1-201ENST00000604855 2072 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.02□□□□□ -1.77
SHMT2P34897 MFSD8-220ENST00000641243 1422 ntBASIC4.02□□□□□ -1.77
SHMT2P34897 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHMT2P34897 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
SHMT2P34897 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 AC026951.1-201ENST00000559530 2459 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 SNORA60-201ENST00000362396 134 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 SNORA27.3-201ENST00000364937 134 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC093719.1-202ENST00000392735 373 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 RN7SKP222-201ENST00000410651 315 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AL450992.3-201ENST00000413192 568 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.01□□□□□ -1.77
SHMT2P34897 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.01□□□□□ -1.77
SHMT2P34897 RPS27AP12-201ENST00000429552 465 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 NDUFA5P10-201ENST00000432147 357 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AL121877.1-201ENST00000453704 622 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC093267.1-201ENST00000489176 961 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.01□□□□□ -1.77
SHMT2P34897 CDH12P2-201ENST00000504393 298 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 HPRT1P2-201ENST00000505250 544 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC093770.1-201ENST00000511559 571 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.01□□□□□ -1.77
SHMT2P34897 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 AL360157.1-201ENST00000565962 87 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.01□□□□□ -1.77
SHMT2P34897 RN7SL600P-201ENST00000581811 299 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.01□□□□□ -1.77
SHMT2P34897 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 AL133247.2-201ENST00000603236 482 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 KATNBL1P1-201ENST00000605192 748 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 AC064801.1-201ENST00000612025 407 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHMT2P34897 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHMT2P34897 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms