Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 S100A11P1-201ENST00000477525 312 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 AC113398.2-201ENST00000507630 558 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXA9P31269 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA9P31269 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
HOXA9P31269 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXA9P31269 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXA9P31269 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXA9P31269 PNPT1P2-201ENST00000456768 2050 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXA9P31269 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 LINC01355-201ENST00000566551 5444 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 RNU4-7P-201ENST00000364758 141 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 SNORA57.3-201ENST00000411095 141 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA9P31269 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC073335.1-201ENST00000427776 363 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC092013.1-201ENST00000438795 332 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA9P31269 RPL6P5-201ENST00000445678 828 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 MTND6P6-201ENST00000478031 263 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 RPS4XP15-201ENST00000489210 795 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AP000926.3-201ENST00000497201 299 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 PPBPP1-201ENST00000510807 373 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 RNU7-143P-201ENST00000516781 65 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA9P31269 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC025423.2-201ENST00000537570 439 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA9P31269 MIR3944-201ENST00000581277 108 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA9P31269 AC015813.4-201ENST00000610469 179 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 AL356274.1-201ENST00000617064 410 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 AL645927.2-201ENST00000618350 349 ntBASIC4.23□□□□□ -1.73
HOXA9P31269 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA9P31269 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HOXA9P31269 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA9P31269 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 AC067945.1-201ENST00000342609 618 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 RNA5SP502-201ENST00000362694 119 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 AL607077.1-201ENST00000401718 499 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 HMGB3P19-201ENST00000403971 560 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 AC096644.3-201ENST00000416788 338 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 TPTE2P1-204ENST00000435256 593 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 TBCAP1-201ENST00000436520 327 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXA9P31269 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 RPS11P1-201ENST00000451072 473 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXA9P31269 RN7SL271P-201ENST00000487601 295 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA9P31269 KRT19P6-201ENST00000510983 209 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 TRMT10BP1-201ENST00000519377 943 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 YPEL5P3-201ENST00000547227 352 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA9P31269 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.22□□□□□ -1.73
HOXA9P31269 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXA9P31269 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA9P31269 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA9P31269 AC134882.1-201ENST00000603738 1676 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms