Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR3922-201ENST00000585192 84 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 AL139395.1-201ENST00000603662 160 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.92□□□□□ -1.46
CLIP1P30622 OR5AC4P-202ENST00000642086 985 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP1P30622 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLIP1P30622 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.92□□□□□ -1.46
CLIP1P30622 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.92□□□□□ -1.46
CLIP1P30622 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.92□□□□□ -1.46
CLIP1P30622 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP1P30622 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP1P30622 AC007823.1-201ENST00000569932 1566 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 AC093535.2-201ENST00000624769 2326 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 MTCO1P12-201ENST00000414273 1543 ntBASIC5.92□□□□□ -1.46
CLIP1P30622 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 HLFP1-201ENST00000402375 499 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 JKAMPP1-201ENST00000413804 919 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AC104978.1-201ENST00000449387 391 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 PPIAP3-201ENST00000450588 505 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 TRBV12-2-201ENST00000489763 344 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP1P30622 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 RANP9-201ENST00000519957 271 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP1P30622 MIR3200-201ENST00000580767 85 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 MTND5P1-201ENST00000445440 1375 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 MFSD8-236ENST00000641509 4050 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 RPS7P15-201ENST00000415804 584 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AC010740.1-201ENST00000417035 684 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 OR5AW1P-201ENST00000426334 1006 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 CYCSP4-201ENST00000429682 331 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP1P30622 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP1P30622 AC073387.1-201ENST00000453261 709 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 DEFB109D-201ENST00000529497 240 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AC020914.6-201ENST00000594327 272 ntBASIC5.91□□□□□ -1.46
CLIP1P30622 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP1P30622 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP1P30622 AC074029.4-201ENST00000624796 1859 ntBASIC5.9□□□□□ -1.46
CLIP1P30622 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLIP1P30622 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.9□□□□□ -1.47
CLIP1P30622 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
CLIP1P30622 SNORD9-201ENST00000362566 104 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.9□□□□□ -1.47
CLIP1P30622 DPPA2P2-201ENST00000418220 897 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.9□□□□□ -1.47
CLIP1P30622 AC091390.3-201ENST00000426478 338 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.9□□□□□ -1.47
CLIP1P30622 AL645931.1-201ENST00000439737 410 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.9□□□□□ -1.47
CLIP1P30622 APOOP2-201ENST00000461561 539 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 RPL5P30-201ENST00000465511 891 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.9□□□□□ -1.47
CLIP1P30622 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.9□□□□□ -1.47
CLIP1P30622 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.9□□□□□ -1.47
CLIP1P30622 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.9□□□□□ -1.47
CLIP1P30622 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.9□□□□□ -1.47
CLIP1P30622 AC244517.3-201ENST00000616254 1235 ntBASIC5.9□□□□□ -1.47
CLIP1P30622 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLIP1P30622 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP1P30622 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLIP1P30622 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP1P30622 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP1P30622 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP1P30622 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP1P30622 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP1P30622 AC007068.1-201ENST00000396690 844 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 RNA5SP39-201ENST00000411245 120 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP1P30622 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP1P30622 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP1P30622 AC006480.1-201ENST00000449887 378 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 RPL23AP12-201ENST00000467573 473 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 AL358832.1-201ENST00000497800 389 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 AC109458.1-201ENST00000508858 316 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 AL160281.1-201ENST00000605307 311 ntBASIC5.89□□□□□ -1.47
CLIP1P30622 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP1P30622 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLIP1P30622 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP1P30622 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP1P30622 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP1P30622 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLIP1P30622 RNA5SP104-201ENST00000410989 118 ntBASIC5.88□□□□□ -1.47
CLIP1P30622 AL160275.2-201ENST00000412010 394 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms