Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 YPEL5P3-201ENST00000547227 352 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC022968.1-201ENST00000567372 442 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.33□□□□□ -1.88
COL8A2P25067 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.33□□□□□ -1.88
COL8A2P25067 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC104662.1-201ENST00000604448 511 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.33□□□□□ -1.88
COL8A2P25067 AC078899.5-201ENST00000612475 178 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 AC015922.4-201ENST00000612568 690 ntBASIC3.33□□□□□ -1.88
COL8A2P25067 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL8A2P25067 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
COL8A2P25067 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC011266.1-201ENST00000624119 3569 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.32□□□□□ -1.88
COL8A2P25067 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 RNA5SP97-201ENST00000365006 84 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 SNORA62.3-201ENST00000365110 153 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
COL8A2P25067 OR13C3-201ENST00000374781 1108 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AL359837.1-201ENST00000381357 287 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 MIR1251-201ENST00000408552 70 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 SNORA3C-201ENST00000408792 125 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AL450992.3-201ENST00000413192 568 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AL445584.1-201ENST00000431451 330 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 ARL4AP4-201ENST00000434170 518 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 ELOCP18-201ENST00000434209 337 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC007389.2-201ENST00000434630 306 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC007688.1-201ENST00000475592 759 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 RPL21P129-201ENST00000491732 478 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AL133372.1-201ENST00000493565 745 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC139783.2-201ENST00000504847 1145 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC091917.2-201ENST00000505002 744 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AP001960.1-201ENST00000506494 658 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC017037.1-201ENST00000508460 471 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.32□□□□□ -1.88
COL8A2P25067 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 RNU6-352P-201ENST00000516908 107 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.32□□□□□ -1.88
COL8A2P25067 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 AC122134.1-201ENST00000565664 1104 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 SNORD39.2-201ENST00000579995 76 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 SNX6P1-201ENST00000601728 1224 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 AL135786.2-201ENST00000608422 615 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC245389.2-201ENST00000616023 576 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC006133.1-201ENST00000617106 264 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC242843.1-201ENST00000618702 573 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 AC124312.6-202ENST00000623624 418 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL8A2P25067 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 HSPD1P11-201ENST00000508643 1702 ntBASIC3.32□□□□□ -1.88
COL8A2P25067 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.32□□□□□ -1.88
COL8A2P25067 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL8A2P25067 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
COL8A2P25067 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
COL8A2P25067 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.31□□□□□ -1.88
COL8A2P25067 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL8A2P25067 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL8A2P25067 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COL8A2P25067 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL8A2P25067 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL8A2P25067 RNU1-85P-201ENST00000364127 164 ntBASIC3.31□□□□□ -1.88
COL8A2P25067 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
COL8A2P25067 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COL8A2P25067 RPL7AP73-201ENST00000413490 353 ntBASIC3.31□□□□□ -1.88
COL8A2P25067 RAC1P3-201ENST00000416129 580 ntBASIC3.31□□□□□ -1.88
COL8A2P25067 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.31□□□□□ -1.88
COL8A2P25067 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.31□□□□□ -1.88
COL8A2P25067 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.31□□□□□ -1.88
COL8A2P25067 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
COL8A2P25067 RRM2P4-201ENST00000441721 562 ntBASIC3.31□□□□□ -1.88
COL8A2P25067 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms