Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RFX1P22670 AC127391.1-201ENST00000411737 98 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.88□□□□□ -1.31
RFX1P22670 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 AC104850.1-201ENST00000435940 476 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 AL391987.1-201ENST00000441025 200 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 RPL5P7-201ENST00000444235 813 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 COX4I1P2-201ENST00000447446 547 ntBASIC6.88□□□□□ -1.31
RFX1P22670 PRPF38AP1-201ENST00000451976 933 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 AP1S2P1-201ENST00000457344 379 ntBASIC6.88□□□□□ -1.31
RFX1P22670 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.88□□□□□ -1.31
RFX1P22670 RPL36AP51-201ENST00000487216 318 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AC079382.1-201ENST00000493346 557 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AC106872.4-201ENST00000510050 523 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AL133399.1-201ENST00000527476 298 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.88□□□□□ -1.31
RFX1P22670 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.88□□□□□ -1.31
RFX1P22670 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 AC009101.1-201ENST00000568135 242 ntBASIC6.88□□□□□ -1.31
RFX1P22670 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.88□□□□□ -1.31
RFX1P22670 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX1P22670 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.88□□□□□ -1.31
RFX1P22670 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.88□□□□□ -1.31
RFX1P22670 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.88□□□□□ -1.31
RFX1P22670 AL133173.2-201ENST00000614270 90 ntBASIC6.88□□□□□ -1.31
RFX1P22670 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.88□□□□□ -1.31
RFX1P22670 MTND1P37-201ENST00000636562 264 ntBASIC6.88□□□□□ -1.31
RFX1P22670 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RFX1P22670 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFX1P22670 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFX1P22670 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFX1P22670 AC130650.2-201ENST00000618736 2403 ntBASIC6.88□□□□□ -1.31
RFX1P22670 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
RFX1P22670 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.88□□□□□ -1.31
RFX1P22670 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFX1P22670 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.88□□□□□ -1.31
RFX1P22670 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFX1P22670 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.87□□□□□ -1.31
RFX1P22670 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 MTCO1P7-201ENST00000419523 1542 ntBASIC6.87□□□□□ -1.31
RFX1P22670 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.87□□□□□ -1.31
RFX1P22670 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 Y_RNA.263-201ENST00000364659 114 ntBASIC6.87□□□□□ -1.31
RFX1P22670 RNU6-282P-201ENST00000365357 103 ntBASIC6.87□□□□□ -1.31
RFX1P22670 RNU1-84P-201ENST00000365447 164 ntBASIC6.87□□□□□ -1.31
RFX1P22670 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 XGY1-201ENST00000381172 446 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC013429.2-201ENST00000418798 781 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 RPS3P2-201ENST00000421346 701 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AL445466.1-201ENST00000448432 357 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 PMCHL2-203ENST00000457791 237 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC068228.1-201ENST00000461723 211 ntBASIC6.87□□□□□ -1.31
RFX1P22670 RPL7P39-201ENST00000481157 744 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 AP003072.2-201ENST00000527756 676 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.87□□□□□ -1.31
RFX1P22670 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.87□□□□□ -1.31
RFX1P22670 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 ANP32BP3-201ENST00000559213 706 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC123786.2-201ENST00000603459 275 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AC005191.1-201ENST00000603950 358 ntBASIC6.87□□□□□ -1.31
RFX1P22670 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AL445222.1-201ENST00000607259 628 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AL136295.6-201ENST00000610486 658 ntBASIC6.87□□□□□ -1.31
RFX1P22670 AL136221.1-201ENST00000621449 509 ntBASIC6.87□□□□□ -1.31
RFX1P22670 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RFX1P22670 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RFX1P22670 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
RFX1P22670 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms