Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN1P18031 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN1P18031 DNAJC19P1-201ENST00000455312 319 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC096741.1-201ENST00000472250 846 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 RN7SL222P-201ENST00000476452 299 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC015724.1-201ENST00000478577 156 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN1P18031 RPL7P38-201ENST00000488396 739 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN1P18031 AC008953.1-201ENST00000497334 318 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 RPSAP51-201ENST00000497462 645 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 IGBP1P4-201ENST00000503202 879 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC008638.1-201ENST00000506035 866 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN1P18031 HMGN1P9-201ENST00000515212 298 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 RNU6-885P-201ENST00000516607 104 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN1P18031 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN1P18031 NPM1P47-201ENST00000560843 856 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN1P18031 AC067959.1-201ENST00000604334 379 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC013476.2-201ENST00000614456 459 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AC012414.7-202ENST00000622705 1090 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 AL603839.4-201ENST00000624658 1005 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN1P18031 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN1P18031 DBF4P1-201ENST00000412976 1892 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN1P18031 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN1P18031 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN1P18031 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
PTPN1P18031 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN1P18031 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PTPN1P18031 CR383658.2-201ENST00000547576 1525 ntBASIC5.64□□□□□ -1.51
PTPN1P18031 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTPN1P18031 AP001284.1-201ENST00000528393 2118 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
PTPN1P18031 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN1P18031 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 OR10J6P-201ENST00000289731 930 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 RN7SKP145-201ENST00000363291 303 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PTPN1P18031 RNU6-729P-201ENST00000384399 107 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 DUTP5-201ENST00000406790 469 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 RPL21P108-201ENST00000413857 481 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 EIF1P1-201ENST00000421436 341 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC104651.1-201ENST00000427559 735 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AL513175.1-201ENST00000431492 780 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AL512286.1-201ENST00000439244 400 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN1P18031 YWHAQP9-201ENST00000445891 512 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN1P18031 EPS15P1-201ENST00000448836 336 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC005532.2-201ENST00000467154 373 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC006499.3-201ENST00000506077 748 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 OR10G5P-201ENST00000532733 358 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN1P18031 GTF2IP22-201ENST00000554443 182 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN1P18031 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC138915.2-201ENST00000569776 97 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 MIR7853-201ENST00000584820 132 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC020914.6-201ENST00000594327 272 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN1P18031 AC024941.1-201ENST00000612250 334 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC090527.3-201ENST00000619041 548 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 ATE1-AS1-202ENST00000636460 506 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC099654.12-201ENST00000639868 649 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 PROS2P-201ENST00000474651 1951 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 AC020633.1-201ENST00000468439 2247 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 MTCO1P7-201ENST00000419523 1542 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PTPN1P18031 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN1P18031 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN1P18031 PABPC1P9-201ENST00000426076 1612 ntBASIC5.63□□□□□ -1.51
PTPN1P18031 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms