Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LARP1BP2-201ENST00000486594 519 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 RPL32P33-201ENST00000487023 394 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AL358832.1-201ENST00000497800 389 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 AC025674.1-201ENST00000507074 324 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC109481.1-201ENST00000509173 282 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC091912.1-201ENST00000511351 248 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 RNA5SP340-201ENST00000517132 107 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 IGLV3-24-201ENST00000517477 197 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.55□□□□□ -1.52
COL6A2P12110 AC005363.1-201ENST00000530779 351 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.55□□□□□ -1.52
COL6A2P12110 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 CYCSP2-201ENST00000558168 301 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 AC063977.5-201ENST00000601044 974 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AL499605.1-201ENST00000604628 403 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 FAM27E4-201ENST00000605259 342 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.55□□□□□ -1.52
COL6A2P12110 AC091304.9-201ENST00000612091 226 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 AL356321.1-201ENST00000621360 228 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 OR5AK4P-201ENST00000635912 903 ntBASIC5.55□□□□□ -1.52
COL6A2P12110 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL6A2P12110 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL6A2P12110 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.55□□□□□ -1.52
COL6A2P12110 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL6A2P12110 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 AC025125.1-201ENST00000624743 1922 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL6A2P12110 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 RPS24P12-201ENST00000402084 394 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 MTCYBP36-201ENST00000404146 440 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AL009179.1-201ENST00000406085 265 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 RNU6-248P-201ENST00000410720 107 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 HMGN1P14-201ENST00000412459 517 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 Z97055.1-201ENST00000419730 712 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 GLRXP1-201ENST00000423261 334 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC115283.1-201ENST00000427353 400 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 MTND4P25-201ENST00000441039 533 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 RPL7P36-201ENST00000444633 681 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.54□□□□□ -1.52
COL6A2P12110 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 AC068228.1-201ENST00000461723 211 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC091564.1-201ENST00000464563 479 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AP000797.2-201ENST00000475768 606 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC090638.1-201ENST00000498296 909 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 PRDX4P1-201ENST00000507189 574 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 DUTP7-201ENST00000507982 486 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.54□□□□□ -1.52
COL6A2P12110 PGBD4P4-201ENST00000509673 613 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.54□□□□□ -1.52
COL6A2P12110 RNA5SP230-201ENST00000517039 122 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 IGLVIV-64-201ENST00000518581 301 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.54□□□□□ -1.52
COL6A2P12110 AF279873.1-201ENST00000523393 313 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 IGLV3-30-201ENST00000524362 298 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 OR4A45P-201ENST00000529954 901 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.54□□□□□ -1.52
COL6A2P12110 TOMM20P1-201ENST00000534518 427 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.54□□□□□ -1.52
COL6A2P12110 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.54□□□□□ -1.52
COL6A2P12110 AL845552.1-201ENST00000556820 323 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 SNORA59B-202ENST00000578183 701 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 AC091488.1-201ENST00000604239 660 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 AC027807.2-201ENST00000616099 408 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms