Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ELOCP15-201ENST00000442090 332 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.23□□□□□ -1.73
COL11A1P12107 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.23□□□□□ -1.73
COL11A1P12107 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.23□□□□□ -1.73
COL11A1P12107 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.23□□□□□ -1.73
COL11A1P12107 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.23□□□□□ -1.73
COL11A1P12107 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL11A1P12107 AC243756.2-201ENST00000618406 463 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AP000553.6-201ENST00000641242 118 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.23□□□□□ -1.73
COL11A1P12107 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.22□□□□□ -1.73
COL11A1P12107 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL11A1P12107 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 AC011266.1-201ENST00000624119 3569 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 ATP5JP1-201ENST00000431631 322 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.22□□□□□ -1.73
COL11A1P12107 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 RPL21P6-201ENST00000479171 504 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 NPM1P29-201ENST00000483112 803 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 SNORA70.24-201ENST00000517233 118 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.22□□□□□ -1.73
COL11A1P12107 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL11A1P12107 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.22□□□□□ -1.73
COL11A1P12107 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.22□□□□□ -1.73
COL11A1P12107 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL11A1P12107 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL11A1P12107 AC005972.3-201ENST00000606304 481 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AL354976.1-201ENST00000613843 387 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AL442067.2-201ENST00000614033 363 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL11A1P12107 AL596275.2-204ENST00000641628 552 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AL596275.2-206ENST00000641957 626 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 IPO8P1-201ENST00000455509 3109 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.22□□□□□ -1.73
COL11A1P12107 AL442128.2-201ENST00000620246 1824 ntBASIC4.22□□□□□ -1.73
COL11A1P12107 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL11A1P12107 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
COL11A1P12107 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 AL035458.1-201ENST00000433096 585 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 CYCSP32-201ENST00000440548 321 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 TPTE2P3-201ENST00000441562 1189 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.21□□□□□ -1.74
COL11A1P12107 DUX4L52-201ENST00000549363 777 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 AC006272.2-201ENST00000594725 163 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 AC016590.3-201ENST00000611171 753 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 AC092435.4-201ENST00000623012 4159 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 DDX18P6-201ENST00000450119 1997 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL11A1P12107 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL11A1P12107 RNA5SP267-201ENST00000364893 126 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 PDSS1P2-201ENST00000449397 678 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 OR52Y1P-201ENST00000452418 828 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.21□□□□□ -1.74
COL11A1P12107 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 STMN1P2-201ENST00000508435 439 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.21□□□□□ -1.74
COL11A1P12107 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.21□□□□□ -1.74
COL11A1P12107 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.21□□□□□ -1.74
COL11A1P12107 MIR5195-201ENST00000583555 115 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 U4.6-201ENST00000621618 127 ntBASIC4.21□□□□□ -1.74
COL11A1P12107 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.21□□□□□ -1.74
COL11A1P12107 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL11A1P12107 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
COL11A1P12107 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
COL11A1P12107 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL11A1P12107 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL11A1P12107 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.2□□□□□ -1.74
COL11A1P12107 RNA5SP197-201ENST00000363357 119 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 HSFY4P-201ENST00000415994 1181 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.2□□□□□ -1.74
COL11A1P12107 SETD6P1-201ENST00000444575 317 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.2□□□□□ -1.74
COL11A1P12107 SUMO2P20-201ENST00000520803 283 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
COL11A1P12107 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms