Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.81□□□□□ -1.48
SNRPA1P09661 CYCSP34-201ENST00000458172 304 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 MTND2P14-201ENST00000482139 351 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 MRPS33P3-201ENST00000513456 322 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 MTCYBP19-201ENST00000517463 1124 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.81□□□□□ -1.48
SNRPA1P09661 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.81□□□□□ -1.48
SNRPA1P09661 AC090819.1-201ENST00000523800 1111 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 MTND2P26-201ENST00000528255 1029 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 AC006518.2-201ENST00000542513 940 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.81□□□□□ -1.48
SNRPA1P09661 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.81□□□□□ -1.48
SNRPA1P09661 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.81□□□□□ -1.48
SNRPA1P09661 AP005136.1-201ENST00000579765 429 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 MIR4660-201ENST00000583549 74 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC015688.2-201ENST00000584523 262 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL020997.3-201ENST00000602843 359 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC092653.1-201ENST00000608509 531 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AL031658.2-201ENST00000616850 651 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AC098679.4-201ENST00000624241 654 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 AP000843.1-201ENST00000624880 701 ntBASIC5.81□□□□□ -1.48
SNRPA1P09661 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
SNRPA1P09661 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.81□□□□□ -1.48
SNRPA1P09661 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.81□□□□□ -1.48
SNRPA1P09661 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNRPA1P09661 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 LINC00622-201ENST00000562811 1570 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNRPA1P09661 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNRPA1P09661 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
SNRPA1P09661 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AL390862.1-201ENST00000635467 1469 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 RN7SKP227-201ENST00000364445 330 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 AL672167.2-201ENST00000377164 879 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 RNU6-729P-201ENST00000384399 107 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 RNA5SP187-201ENST00000384400 119 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 SNORD65C-201ENST00000390962 71 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.8□□□□□ -1.48
SNRPA1P09661 RPS7P9-201ENST00000414704 586 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 MFSD13B-201ENST00000420133 1290 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 RAD23BP1-201ENST00000421404 1227 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 RPP40P1-201ENST00000426762 456 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 HMGB3P6-201ENST00000444896 598 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 EXTL2P1-201ENST00000446218 416 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC126121.1-201ENST00000482313 553 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 BTG4P1-201ENST00000510421 183 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.8□□□□□ -1.48
SNRPA1P09661 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.8□□□□□ -1.48
SNRPA1P09661 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AP000619.2-201ENST00000546014 969 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 PSMB7P1-201ENST00000556349 514 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC009237.15-201ENST00000610252 501 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
SNRPA1P09661 AC068724.3-201ENST00000625906 87 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.8□□□□□ -1.48
SNRPA1P09661 OR2L1P-202ENST00000641567 1023 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 MTCO1P18-201ENST00000455518 1419 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 AC090017.1-201ENST00000548612 1779 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 Z95331.1-201ENST00000623075 23112 ntBASIC5.8□□□□□ -1.48
SNRPA1P09661 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNRPA1P09661 AL022322.2-201ENST00000624072 20397 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AC008079.2-201ENST00000623543 20396 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNRPA1P09661 STX3-208ENST00000641815 3236 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNRPA1P09661 OR5P1P-201ENST00000299512 925 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AC011933.1-201ENST00000413334 321 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 ELOCP9-201ENST00000418624 239 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AC246680.2-201ENST00000422106 389 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 VTI1BP4-201ENST00000427516 527 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.79□□□□□ -1.48
SNRPA1P09661 CASP3P1-201ENST00000446037 609 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 PHBP16-201ENST00000446318 950 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNRPA1P09661 AC009963.2-201ENST00000453431 138 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.79□□□□□ -1.48
SNRPA1P09661 AC116533.1-201ENST00000459748 321 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 CR383656.1-201ENST00000484916 377 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.79□□□□□ -1.48
SNRPA1P09661 AC093815.1-201ENST00000508637 280 ntBASIC5.79□□□□□ -1.48
SNRPA1P09661 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.79□□□□□ -1.48
SNRPA1P09661 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms