Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3□□□□□ -1.93
CXCL1P09341 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 AL627308.1-201ENST00000435693 821 ntBASIC3□□□□□ -1.93
CXCL1P09341 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 AC098824.1-201ENST00000453565 980 ntBASIC3□□□□□ -1.93
CXCL1P09341 AC010401.1-201ENST00000463867 348 ntBASIC3□□□□□ -1.93
CXCL1P09341 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 RPL21P126-201ENST00000470049 478 ntBASIC3□□□□□ -1.93
CXCL1P09341 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3□□□□□ -1.93
CXCL1P09341 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3□□□□□ -1.93
CXCL1P09341 RPS4XP22-201ENST00000480755 780 ntBASIC3□□□□□ -1.93
CXCL1P09341 RN7SL691P-201ENST00000494487 301 ntBASIC3□□□□□ -1.93
CXCL1P09341 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CXCL1P09341 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3□□□□□ -1.93
CXCL1P09341 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3□□□□□ -1.93
CXCL1P09341 AC124312.6-202ENST00000623624 418 ntBASIC3□□□□□ -1.93
CXCL1P09341 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 CR788268.1-201ENST00000603931 1809 ntBASIC3□□□□□ -1.93
CXCL1P09341 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.99□□□□□ -1.93
CXCL1P09341 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CXCL1P09341 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 AL118496.1-201ENST00000440201 1812 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 SNORD35B-201ENST00000363660 87 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 MIR129-1-201ENST00000384972 72 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 RPS26P8-201ENST00000393490 348 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 RNA5SP36-201ENST00000410197 133 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC069218.2-201ENST00000411665 344 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 AC073464.3-201ENST00000422564 712 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 BX679664.1-201ENST00000434429 253 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.99□□□□□ -1.93
CXCL1P09341 HMGB1P37-201ENST00000439613 609 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AL513533.1-201ENST00000453728 415 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC109327.1-201ENST00000471666 403 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 CYCSP20-201ENST00000473154 315 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC004453.1-201ENST00000487895 408 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC111000.5-201ENST00000506559 1178 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 IGBP1P5-201ENST00000507524 1000 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 NDUFB5P1-201ENST00000508134 564 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 RN7SKP209-201ENST00000516888 304 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CXCL1P09341 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 TGIF1P1-201ENST00000558095 802 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.99□□□□□ -1.93
CXCL1P09341 MIR5684-201ENST00000585074 65 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC006254.3-201ENST00000603353 884 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC090948.1-201ENST00000607464 549 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AL096803.3-201ENST00000609032 532 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AL592494.3-201ENST00000609485 464 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC123768.4-201ENST00000616244 701 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AP003400.2-201ENST00000624036 666 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 AC004943.3-201ENST00000624116 600 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL1P09341 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.99□□□□□ -1.93
CXCL1P09341 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 RARSP1-201ENST00000542842 1418 ntBASIC2.99□□□□□ -1.93
CXCL1P09341 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CXCL1P09341 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.99□□□□□ -1.93
CXCL1P09341 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CXCL1P09341 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 AC131971.1-201ENST00000332881 1482 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 AC116667.1-201ENST00000604855 2072 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CXCL1P09341 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CXCL1P09341 AL590139.1-201ENST00000416267 400 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 MFSD13B-201ENST00000420133 1290 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 OR5AW1P-201ENST00000426334 1006 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 CALM1P2-201ENST00000452941 448 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 HMGN2P7-201ENST00000456186 273 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.98□□□□□ -1.93
CXCL1P09341 AC010683.1-201ENST00000473673 378 ntBASIC2.98□□□□□ -1.93
CXCL1P09341 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms