Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC107027.3-201ENST00000565095 3473 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 CASC19-284ENST00000642142 1868 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 RPL32P3-201ENST00000359025 275 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 MIR383-201ENST00000362257 73 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 RPL23AP38-201ENST00000423801 469 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 COX6B1P7-201ENST00000430845 235 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC245517.2-201ENST00000442890 346 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AL157827.1-201ENST00000447622 132 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC009963.2-201ENST00000453431 138 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC021205.1-201ENST00000468797 348 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC091167.1-201ENST00000492017 396 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC083829.1-201ENST00000503756 657 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 HMGB1P47-201ENST00000511281 589 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 MTND1P6-201ENST00000523621 946 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC023575.1-201ENST00000580510 358 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AL161729.3-201ENST00000603533 673 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 FAM27D1-201ENST00000612308 341 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.59□□□□□ -1.83
HLA-DPB1P04440 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
HLA-DPB1P04440 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DPB1P04440 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 SNORD35B-201ENST00000363660 87 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 OR6C69P-201ENST00000394268 893 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AL161909.1-201ENST00000397390 712 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC115285.1-201ENST00000424879 736 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 NPM1P34-201ENST00000428821 893 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 TRIM60P13-201ENST00000432350 1283 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MTND6P18-201ENST00000439477 513 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC114878.1-201ENST00000441166 358 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 H2AFZP6-201ENST00000444403 394 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 RPS20P4-201ENST00000461659 355 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 UQCRHP4-201ENST00000471686 272 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 RN7SL809P-201ENST00000482040 297 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC026979.1-201ENST00000492525 396 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 RNU6-760P-201ENST00000516078 97 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 HIGD1AP5-201ENST00000529959 259 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MIR3939-201ENST00000582614 106 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC011477.5-201ENST00000586571 259 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AP004372.1-201ENST00000604842 844 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC135803.1-201ENST00000608748 565 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MIR378J-201ENST00000611988 109 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MIR3653-201ENST00000625572 110 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 AC119674.1-212ENST00000641155 993 ntBASIC3.58□□□□□ -1.84
HLA-DPB1P04440 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DPB1P04440 MTND4P10-201ENST00000446199 1363 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms