Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL4A1P02462 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 MIR128-1-201ENST00000384921 82 ntBASIC4.42□□□□□ -1.7
COL4A1P02462 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.42□□□□□ -1.7
COL4A1P02462 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A1P02462 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.42□□□□□ -1.7
COL4A1P02462 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A1P02462 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.42□□□□□ -1.7
COL4A1P02462 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A1P02462 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
COL4A1P02462 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A1P02462 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.42□□□□□ -1.7
COL4A1P02462 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
COL4A1P02462 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A1P02462 SAGE2P-201ENST00000420011 2126 ntBASIC4.42□□□□□ -1.7
COL4A1P02462 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A1P02462 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A1P02462 BTF3P5-201ENST00000457252 467 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A1P02462 AC010342.1-201ENST00000514047 877 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.41□□□□□ -1.7
COL4A1P02462 AC005000.2-201ENST00000605468 310 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC011816.2-201ENST00000607089 556 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC091905.1-201ENST00000624400 311 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A1P02462 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL4A1P02462 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL4A1P02462 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A1P02462 RN7SKP97-201ENST00000410966 333 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A1P02462 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.41□□□□□ -1.7
COL4A1P02462 BNIP3P19-201ENST00000605397 577 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A1P02462 MIR7112-201ENST00000616126 65 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC127502.3-201ENST00000636170 1206 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 AC138627.1-204ENST00000641894 765 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A1P02462 AC090337.1-201ENST00000579651 2074 ntBASIC4.41□□□□□ -1.7
COL4A1P02462 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A1P02462 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A1P02462 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A1P02462 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.4□□□□□ -1.7
COL4A1P02462 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A1P02462 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
COL4A1P02462 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A1P02462 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A1P02462 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A1P02462 RHOT1P2-201ENST00000366423 333 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 RNA5SP120-201ENST00000410900 112 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 AC127537.2-201ENST00000439258 465 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A1P02462 AC010285.3-201ENST00000511668 676 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 TCP11X3P-202ENST00000514289 1254 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.4□□□□□ -1.71
COL4A1P02462 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A1P02462 AP000889.1-201ENST00000530968 660 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A1P02462 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A1P02462 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A1P02462 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.4□□□□□ -1.71
COL4A1P02462 AL133247.2-201ENST00000603236 482 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 MIR8057-201ENST00000620957 69 ntBASIC4.4□□□□□ -1.71
COL4A1P02462 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A1P02462 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.4□□□□□ -1.71
COL4A1P02462 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A1P02462 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A1P02462 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL4A1P02462 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL4A1P02462 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A1P02462 AL122016.1-201ENST00000403365 367 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.39□□□□□ -1.71
COL4A1P02462 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.39□□□□□ -1.71
COL4A1P02462 AL691447.1-201ENST00000419456 387 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL4A1P02462 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms