Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC007537.2-201ENST00000472093 511 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 RPL29P14-201ENST00000495837 428 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 IGLVIV-65-201ENST00000517313 360 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 OR8G5-201ENST00000524943 1041 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AC105233.3-201ENST00000531125 744 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 NPM1P35-201ENST00000533043 868 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 TRAV8-5-201ENST00000537369 341 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AC018552.3-201ENST00000567416 561 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AC011492.1-201ENST00000600023 315 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AC090948.1-201ENST00000607464 549 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 MIR6715B-201ENST00000637172 77 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 AP000756.2-201ENST00000624168 2567 ntBASIC3.42□□□□□ -1.86
HLA-DQB1P01920 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB1P01920 Z82217.1-201ENST00000625157 8149 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC116667.1-201ENST00000604855 2072 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RN7SKP278-201ENST00000410504 342 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RPL12P46-201ENST00000436610 195 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 MORF4L1P4-201ENST00000450245 976 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RNA5SP246-201ENST00000458909 119 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RPL35P6-201ENST00000490024 372 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 PCNAP1-201ENST00000505363 709 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC008802.1-201ENST00000519121 791 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 RPL12P25-202ENST00000598100 674 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AL049539.1-201ENST00000611964 459 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC067852.7-201ENST00000623270 535 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC119674.1-220ENST00000641502 1048 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 AC092079.1-201ENST00000558620 1985 ntBASIC3.41□□□□□ -1.86
HLA-DQB1P01920 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB1P01920 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB1P01920 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB1P01920 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB1P01920 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQB1P01920 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 MIR421-201ENST00000365696 85 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC017083.1-201ENST00000428093 483 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 RPL12P28-201ENST00000430852 489 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 MTCO1P57-201ENST00000432182 261 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 MRPS33P4-201ENST00000434892 317 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC006466.1-201ENST00000438721 289 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC010468.1-201ENST00000461022 817 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 RPL21P71-201ENST00000465598 459 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 HMGB3P14-201ENST00000494195 599 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQB1P01920 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 RN7SKP92-201ENST00000517266 244 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 AC010476.1-201ENST00000519111 851 ntBASIC3.4□□□□□ -1.87
HLA-DQB1P01920 SUMO2P20-201ENST00000520803 283 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms