Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 BDP1P-201ENST00000582658 1990 ntBASIC4.25□□□□□ -1.73
SNX3O60493 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.25□□□□□ -1.73
SNX3O60493 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX3O60493 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 SNORA11C-201ENST00000408532 129 ntBASIC4.24□□□□□ -1.73
SNX3O60493 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
SNX3O60493 MTND2P15-201ENST00000418575 892 ntBASIC4.24□□□□□ -1.73
SNX3O60493 RPS12P10-201ENST00000427031 377 ntBASIC4.24□□□□□ -1.73
SNX3O60493 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 VDAC1P6-201ENST00000430062 855 ntBASIC4.24□□□□□ -1.73
SNX3O60493 NRBF2P3-201ENST00000432731 865 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AL353597.2-202ENST00000434901 373 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AL050341.1-201ENST00000447743 313 ntBASIC4.24□□□□□ -1.73
SNX3O60493 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 RAD23BP3-201ENST00000454157 1152 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX3O60493 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 HMGB1P1-201ENST00000522557 636 ntBASIC4.24□□□□□ -1.73
SNX3O60493 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX3O60493 AC006518.2-201ENST00000542513 940 ntBASIC4.24□□□□□ -1.73
SNX3O60493 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 SNORD95-201ENST00000579879 68 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX3O60493 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 NTAN1P1-201ENST00000603150 646 ntBASIC4.24□□□□□ -1.73
SNX3O60493 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 AC018754.1-201ENST00000607486 925 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AL023881.1-201ENST00000621088 301 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AC010608.3-201ENST00000625048 527 ntBASIC4.24□□□□□ -1.73
SNX3O60493 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX3O60493 AL590396.4-201ENST00000636779 956 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AC017104.5-201ENST00000637647 639 ntBASIC4.24□□□□□ -1.73
SNX3O60493 FP325313.1-201ENST00000638228 703 ntBASIC4.24□□□□□ -1.73
SNX3O60493 AC013437.2-201ENST00000639587 677 ntBASIC4.24□□□□□ -1.73
SNX3O60493 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX3O60493 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX3O60493 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX3O60493 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX3O60493 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SNX3O60493 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SNX3O60493 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX3O60493 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX3O60493 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 AC009229.4-201ENST00000623854 1947 ntBASIC4.23□□□□□ -1.73
SNX3O60493 NSRP1P1-201ENST00000444067 1693 ntBASIC4.23□□□□□ -1.73
SNX3O60493 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 RNU6-298P-201ENST00000390888 96 ntBASIC4.23□□□□□ -1.73
SNX3O60493 MCTS2P-201ENST00000394552 546 ntBASIC4.23□□□□□ -1.73
SNX3O60493 OR3A2-201ENST00000408891 1076 ntBASIC4.23□□□□□ -1.73
SNX3O60493 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.23□□□□□ -1.73
SNX3O60493 MTND2P9-201ENST00000422293 931 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC007559.1-201ENST00000428736 355 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC002069.1-201ENST00000429649 1159 ntBASIC4.23□□□□□ -1.73
SNX3O60493 MTCO1P54-201ENST00000430139 712 ntBASIC4.23□□□□□ -1.73
SNX3O60493 ATP5HP2-201ENST00000433885 485 ntBASIC4.23□□□□□ -1.73
SNX3O60493 RPL7P28-201ENST00000437739 740 ntBASIC4.23□□□□□ -1.73
SNX3O60493 PPIAP17-201ENST00000438507 471 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AL929288.2-201ENST00000446368 407 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC239809.1-201ENST00000450470 217 ntBASIC4.23□□□□□ -1.73
SNX3O60493 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX3O60493 CDC42P1-201ENST00000456658 548 ntBASIC4.23□□□□□ -1.73
SNX3O60493 RNU7-140P-201ENST00000459546 60 ntBASIC4.23□□□□□ -1.73
SNX3O60493 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 RPL31P61-201ENST00000496160 376 ntBASIC4.23□□□□□ -1.73
SNX3O60493 BNIP3P41-201ENST00000503774 571 ntBASIC4.23□□□□□ -1.73
SNX3O60493 IGBP1P5-201ENST00000507524 1000 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX3O60493 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 RNA5SP362-201ENST00000516048 118 ntBASIC4.23□□□□□ -1.73
SNX3O60493 RN7SKP157-201ENST00000516174 282 ntBASIC4.23□□□□□ -1.73
SNX3O60493 RNA5SP143-201ENST00000516936 115 ntBASIC4.23□□□□□ -1.73
SNX3O60493 RN7SKP283-201ENST00000517197 270 ntBASIC4.23□□□□□ -1.73
SNX3O60493 IGKV2-38-201ENST00000517443 247 ntBASIC4.23□□□□□ -1.73
SNX3O60493 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 AC008562.1-201ENST00000521763 330 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms