Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 uc_338.18-201ENST00000615451 175 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC012618.3-205ENST00000637896 1496 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM38O00635 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 RN7SKP153-201ENST00000365026 316 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AL078599.1-201ENST00000402075 293 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 SFR1P1-201ENST00000403720 688 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 RNU6-272P-201ENST00000411028 104 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
TRIM38O00635 RPL22P18-201ENST00000417197 377 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AL031736.2-201ENST00000426573 787 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 GTF2IP7-202ENST00000436677 309 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 RPS29P33-201ENST00000456717 146 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 GYG1P1-201ENST00000460864 698 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 RN7SL814P-201ENST00000487715 300 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM38O00635 MTND4LP2-201ENST00000502312 285 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC010486.2-201ENST00000505572 483 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 MTCYBP37-201ENST00000510642 1133 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC012400.1-201ENST00000518452 381 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 OR4A2P-201ENST00000527276 913 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AP001317.1-201ENST00000531194 960 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC023050.2-201ENST00000544968 387 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC092747.2-201ENST00000545069 983 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC137768.1-201ENST00000549998 553 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AGGF1P8-201ENST00000562979 1000 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM38O00635 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC113368.1-201ENST00000603736 382 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC087283.1-201ENST00000604029 1074 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC064872.1-201ENST00000604823 1072 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 AC105227.2-201ENST00000615075 605 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 BX005214.3-202ENST00000619809 325 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM38O00635 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
TRIM38O00635 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM38O00635 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM38O00635 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM38O00635 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 OR5H2-201ENST00000355273 945 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 RNU4-28P-201ENST00000364739 141 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms