Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RPL21P65-201ENST00000406094 466 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.23□□□□□ -1.89
SDCBPO00560 OR5AW1P-201ENST00000426334 1006 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 RPS26P40-201ENST00000435209 294 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.23□□□□□ -1.89
SDCBPO00560 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SDCBPO00560 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.23□□□□□ -1.89
SDCBPO00560 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 RPS7P7-201ENST00000463499 571 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 RPL7P19-201ENST00000469948 618 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 AC026979.1-201ENST00000492525 396 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.23□□□□□ -1.89
SDCBPO00560 RN7SKP122-201ENST00000515923 296 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 DEFB109D-201ENST00000529497 240 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SDCBPO00560 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 AL121576.1-201ENST00000556055 276 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 AL356489.2-201ENST00000566968 3528 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.23□□□□□ -1.89
SDCBPO00560 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 OR5AC4P-202ENST00000642086 985 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.23□□□□□ -1.89
SDCBPO00560 RLIMP1-201ENST00000339626 1680 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 AC134882.1-201ENST00000603738 1676 ntBASIC3.23□□□□□ -1.89
SDCBPO00560 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.23□□□□□ -1.89
SDCBPO00560 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SDCBPO00560 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 RPS4XP5-202ENST00000449995 1334 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 Z73965.1-201ENST00000623412 2297 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SDCBPO00560 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 AL121657.1-201ENST00000327215 531 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 AL049693.1-201ENST00000402760 611 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AL391417.1-201ENST00000404100 426 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 SNORA81-201ENST00000408493 178 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 VN1R31P-201ENST00000417498 730 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.22□□□□□ -1.89
SDCBPO00560 TBCAP1-201ENST00000436520 327 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC099063.2-201ENST00000446360 662 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.22□□□□□ -1.89
SDCBPO00560 AC022431.1-201ENST00000450941 438 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC037198.2-201ENST00000478845 733 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 AC021146.1-201ENST00000511202 716 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 RN7SKP209-201ENST00000516888 304 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 IGKV2D-23-201ENST00000518179 286 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC087369.1-201ENST00000520775 996 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 RFPL1S-203ENST00000539579 330 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.22□□□□□ -1.89
SDCBPO00560 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 AC025884.1-201ENST00000556034 378 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.22□□□□□ -1.89
SDCBPO00560 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 SNX6P1-201ENST00000601728 1224 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC015849.6-201ENST00000605454 474 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AL591034.3-201ENST00000605511 685 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC006946.3-201ENST00000609791 756 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 MIR6748-201ENST00000610433 71 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC004241.3-201ENST00000611728 517 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.22□□□□□ -1.89
SDCBPO00560 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.22□□□□□ -1.89
SDCBPO00560 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
SDCBPO00560 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDCBPO00560 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.22□□□□□ -1.89
SDCBPO00560 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.22□□□□□ -1.89
SDCBPO00560 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SDCBPO00560 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SDCBPO00560 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SDCBPO00560 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC073073.2-201ENST00000609827 2578 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SDCBPO00560 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDCBPO00560 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDCBPO00560 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDCBPO00560 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SDCBPO00560 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC093719.1-202ENST00000392735 373 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 OR8G2P-201ENST00000412796 908 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.21□□□□□ -1.9
SDCBPO00560 AL356095.1-201ENST00000417217 199 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 Z97055.1-201ENST00000419730 712 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RWDD4P2-201ENST00000426392 563 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RPS26P47-201ENST00000427219 348 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 C4BPAP2-201ENST00000428434 478 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.21□□□□□ -1.9
SDCBPO00560 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms