Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.71□□□□□ -1.82
UPK1AO00322 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 AL591034.3-201ENST00000605511 685 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AC012213.4-201ENST00000606457 354 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 RNU4-89P-201ENST00000607443 133 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AC019131.2-201ENST00000609071 870 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 MIR6867-201ENST00000610636 67 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
UPK1AO00322 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 MIR6715B-201ENST00000637172 77 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
UPK1AO00322 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1AO00322 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 CR381670.1-201ENST00000624291 1693 ntBASIC3.71□□□□□ -1.82
UPK1AO00322 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1AO00322 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
UPK1AO00322 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK1AO00322 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 AC068538.1-201ENST00000376856 336 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK1AO00322 RPL30P2-201ENST00000414021 291 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 C4BPAP2-201ENST00000428434 478 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 RPS6P12-201ENST00000432491 726 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1AO00322 BTG3P1-201ENST00000435859 716 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1AO00322 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 HMGB1P37-201ENST00000439613 609 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 RPS17P13-201ENST00000448974 407 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 RPS7P7-201ENST00000463499 571 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC010307.1-201ENST00000467206 836 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 SEPT7P6-201ENST00000469999 1143 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 CEACAMP10-202ENST00000495431 496 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1AO00322 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK1AO00322 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1AO00322 AL590392.1-201ENST00000604960 446 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AL591424.2-201ENST00000617023 128 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC067852.7-201ENST00000623270 535 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 AC112484.5-201ENST00000624189 228 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1AO00322 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1AO00322 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1AO00322 OR11H5P-202ENST00000641612 1325 ntBASIC3.7□□□□□ -1.82
UPK1AO00322 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK1AO00322 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK1AO00322 AL049693.1-201ENST00000402760 611 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RNA5SP317-201ENST00000410176 116 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RNU4-6P-201ENST00000410804 122 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 Y_RNA.625-201ENST00000411256 107 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RNA5SP311-201ENST00000411290 116 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK1AO00322 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK1AO00322 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK1AO00322 SKP1P1-201ENST00000438081 489 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC009263.1-201ENST00000441193 1239 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK1AO00322 AC239809.1-201ENST00000450470 217 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 RPL5P32-201ENST00000454085 879 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RPL31P53-201ENST00000457065 348 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 PPIAP21-201ENST00000464473 501 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 PRELID3BP7-201ENST00000503606 469 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RNA5SP315-201ENST00000516340 116 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 RNA5SP312-201ENST00000517068 116 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK1AO00322 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK1AO00322 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.69□□□□□ -1.82
UPK1AO00322 AC135001.1-201ENST00000544546 283 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 YPEL5P3-201ENST00000547227 352 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms