Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AC012618.3-205ENST00000637896 1496 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM1O00151 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDLIM1O00151 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC079741.1-201ENST00000321498 212 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 RNA5SP307-201ENST00000362863 116 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM1O00151 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM1O00151 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC019070.1-201ENST00000415008 1024 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 HMGB3P5-201ENST00000428894 612 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 USP9YP7-201ENST00000436723 430 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 TPTE2P3-201ENST00000441562 1189 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 USP9YP32-201ENST00000452432 430 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 RN7SL481P-201ENST00000477764 299 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC007686.1-201ENST00000488511 463 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 RPS23P1-201ENST00000491662 432 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC005912.1-201ENST00000495392 255 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 OSBPL9P3-201ENST00000534523 595 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM1O00151 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC025918.2-201ENST00000558683 763 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AC084757.1-201ENST00000559987 490 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM1O00151 RN7SL652P-201ENST00000577769 300 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 MIR4716-201ENST00000579628 84 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC110743.1-201ENST00000584870 478 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 KATNBL1P5-201ENST00000605015 517 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC023043.4-201ENST00000612081 449 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 AC139769.3-201ENST00000618383 175 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 MIR7703-201ENST00000620784 77 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM1O00151 AP006248.3-201ENST00000623580 594 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.16□□□□□ -1.74
PDLIM1O00151 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.16□□□□□ -1.74
PDLIM1O00151 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 BDP1P-201ENST00000582658 1990 ntBASIC4.16□□□□□ -1.74
PDLIM1O00151 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.16□□□□□ -1.74
PDLIM1O00151 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM1O00151 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.15□□□□□ -1.74
PDLIM1O00151 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.15□□□□□ -1.74
PDLIM1O00151 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM1O00151 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM1O00151 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM1O00151 ZNF90P1-201ENST00000480493 1951 ntBASIC4.15□□□□□ -1.74
PDLIM1O00151 OR11H4-201ENST00000315409 1082 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 RNU6-650P-201ENST00000365658 111 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 RNU6-452P-201ENST00000384406 107 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 CYB5AP4-201ENST00000396692 399 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 MIR298-201ENST00000401212 88 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 RAD23BP1-201ENST00000421404 1227 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 NPM1P24-201ENST00000428039 894 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 FO393419.3-201ENST00000428741 282 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC073508.1-201ENST00000428866 656 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 AC017099.1-201ENST00000448261 1028 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC073264.2-201ENST00000448886 166 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 HMGB1P26-201ENST00000452520 628 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 RPL23AP23-201ENST00000452590 471 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AL049830.2-201ENST00000480072 201 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 RPL36AP41-201ENST00000493820 306 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM1O00151 OR5M2P-201ENST00000529003 936 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 AC137768.1-201ENST00000549998 553 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 RPL23AP97-201ENST00000568955 471 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.15□□□□□ -1.75
PDLIM1O00151 MIR548Y-201ENST00000582739 110 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC073091.2-201ENST00000603205 907 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms