Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 CDC27P1-201ENST00000445384 715 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL5P30-201ENST00000465511 891 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC012158.1-204ENST00000483430 465 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 PPM1AP1-201ENST00000502740 1135 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 HPRT1P2-201ENST00000505250 544 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC099676.1-201ENST00000608886 657 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC245389.2-201ENST00000616023 576 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC242843.1-201ENST00000618702 573 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC067931.1-201ENST00000624190 671 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC020978.9-201ENST00000624380 1141 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU6-252P-201ENST00000363232 107 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RN7SKP280-201ENST00000364196 304 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU6-244P-201ENST00000391028 104 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR1179-201ENST00000408703 91 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RN7SKP27-201ENST00000410684 333 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC010385.1-201ENST00000412374 256 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CEACAMP8-201ENST00000413902 580 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC004448.2-201ENST00000422360 586 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC022022.1-201ENST00000430304 178 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AL356276.2-201ENST00000435919 558 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL21P89-201ENST00000444021 467 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL5P32-201ENST00000454085 879 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 NPM1P17-201ENST00000479221 602 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC107398.1-201ENST00000486904 505 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC108064.1-201ENST00000513791 460 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR6875-201ENST00000617506 72 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 FRG1DP-201ENST00000635586 771 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AC119674.1-212ENST00000641155 993 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 ZNF90P1-201ENST00000480493 1951 ntBASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
NEDD8-MDP1E9PL57 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU6-650P-201ENST00000365658 111 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR195-201ENST00000385194 87 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR134-201ENST00000385258 73 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RBMY1KP-201ENST00000423480 476 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL7P2-201ENST00000427639 268 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC239367.2-201ENST00000447309 705 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AL359073.1-201ENST00000448036 403 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms