Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC011944.2-201ENST00000624440 683 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 ATE1-AS1-202ENST00000636460 506 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM49D1C9J1S8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
TRIM49D1C9J1S8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM49D1C9J1S8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM49D1C9J1S8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC098592.2-201ENST00000413158 265 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 RPL7P28-201ENST00000437739 740 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 PPIAP17-201ENST00000438507 471 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL035551.1-201ENST00000446931 348 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 CYCSP42-201ENST00000450823 238 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 DNAJC19P1-201ENST00000455312 319 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 HMGN1P8-201ENST00000463578 288 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL132838.2-201ENST00000492041 314 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 NDUFB4P12-201ENST00000513465 390 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 C1GALT1P3-201ENST00000522049 819 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 PDCD5P1-201ENST00000543528 309 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC092747.2-201ENST00000545069 983 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC091516.1-201ENST00000549191 703 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL049874.4-201ENST00000557593 255 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL731537.2-201ENST00000561565 951 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 ELOCP28-201ENST00000590044 317 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 SNX6P1-201ENST00000601728 1224 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC092474.3-201ENST00000603022 568 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL713998.2-201ENST00000604538 1198 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AL139089.1-201ENST00000620372 975 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC010608.2-201ENST00000624830 470 ntBASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM49D1C9J1S8 AC010329.2-201ENST00000595195 2737 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC096644.3-201ENST00000416788 338 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 RPL21P109-201ENST00000422213 475 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 RPL23AP38-201ENST00000423801 469 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 NIPA2P1-201ENST00000426223 976 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MORF4L1P4-201ENST00000450245 976 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MTCO3P20-201ENST00000454926 688 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 UQCRHP4-201ENST00000471686 272 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC091167.1-201ENST00000492017 396 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 CEACAMP10-202ENST00000495431 496 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC087369.1-201ENST00000520775 996 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC015802.5-201ENST00000607478 399 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MIR378J-201ENST00000611988 109 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC104307.1-201ENST00000616142 196 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM49D1C9J1S8 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms