Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 MAPK10-328ENST00000641553 4009 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 IL6STP1-201ENST00000346911 1020 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 RNA5SP90-201ENST00000364801 99 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU5A-2P-201ENST00000384337 116 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 NUDT19P3-201ENST00000404698 555 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL023807.1-201ENST00000407932 359 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC016769.2-201ENST00000414815 475 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 RPS15AP40-201ENST00000419621 391 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 EI24P4-201ENST00000423683 1078 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 YWHAZP7-201ENST00000436906 631 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL450263.2-201ENST00000439400 589 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 ATG12P2-201ENST00000456830 416 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF705CP-201ENST00000530515 889 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL450489.1-201ENST00000612071 468 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC120349.2-201ENST00000625002 298 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AL390862.1-201ENST00000635467 1469 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC017079.1-201ENST00000333650 415 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 RNA5SP305-201ENST00000362665 119 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 Y_RNA.408-201ENST00000383987 102 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU6-1122P-201ENST00000384449 107 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 TIMM9P2-201ENST00000419324 266 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 CEACAMP7-201ENST00000444105 496 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC073850.1-201ENST00000449243 255 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC104057.1-201ENST00000515547 497 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC022884.2-201ENST00000578535 580 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 MIR4660-201ENST00000583549 74 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC107982.3-201ENST00000584957 985 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC011447.4-201ENST00000587562 111 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC004987.4-201ENST00000603383 338 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 AC118658.2-201ENST00000618697 459 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.78□□□□□ -1.48
COL4A3BPQ9Y5P4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 DDX18P5-201ENST00000534547 1306 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 SAGE4P-201ENST00000442271 3381 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms