Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.46□□□□□ -1.69
PCDHGA1Q9Y5H4 AC090229.1-201ENST00000590983 1609 ntBASIC4.46□□□□□ -1.69
PCDHGA1Q9Y5H4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.46□□□□□ -1.69
PCDHGA1Q9Y5H4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA1Q9Y5H4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA1Q9Y5H4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC021146.4-201ENST00000309229 279 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 RNU1-94P-201ENST00000362627 173 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR134-201ENST00000385258 73 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 ATP5F1P6-201ENST00000402768 767 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR1303-201ENST00000408625 86 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 OR51B3P-201ENST00000412287 913 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 VN1R37P-201ENST00000419096 748 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 SCARNA10-201ENST00000459255 330 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL21P126-201ENST00000470049 478 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC091167.1-201ENST00000492017 396 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AL035404.1-201ENST00000497982 568 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 SNORA31.9-201ENST00000516429 84 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC113192.3-201ENST00000529152 742 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 UBTFL9-201ENST00000534504 1148 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC093249.4-201ENST00000564755 259 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR4458-201ENST00000578872 75 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CCDC58P3-201ENST00000590792 430 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AC095038.2-201ENST00000621464 1070 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 AP002371.2-201ENST00000624450 503 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 U6.107-201ENST00000637108 79 ntBASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA1Q9Y5H4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AL133412.1-201ENST00000380194 2992 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 RPS24P12-201ENST00000402084 394 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 RNU4-27P-201ENST00000410889 139 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC092745.2-202ENST00000411880 369 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 HMGB3P31-201ENST00000413333 595 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AL158050.1-201ENST00000416077 457 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 VN1R42P-201ENST00000424651 344 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 OR2AH1P-201ENST00000425717 928 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 UBE2D3P3-201ENST00000426992 425 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 UBE2V1P6-201ENST00000430840 422 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AL512661.1-201ENST00000434586 1253 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL35AP21-201ENST00000437667 333 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC105402.2-201ENST00000438503 358 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL7P33-201ENST00000444159 742 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 YWHAQP9-201ENST00000445891 512 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AL035407.2-201ENST00000454090 378 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC093166.2-201ENST00000455969 1017 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 EIF2S2P5-201ENST00000457635 968 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 RN7SL98P-201ENST00000462271 300 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AL591473.1-201ENST00000464297 313 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 UQCRHP4-201ENST00000471686 272 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC133963.2-201ENST00000513686 578 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AP003730.1-201ENST00000524605 285 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 OR8G5-201ENST00000524943 1041 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC092451.2-201ENST00000538746 658 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC025884.1-201ENST00000556034 378 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms