Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR551A-201ENST00000385042 96 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 DSTNP4-201ENST00000399472 474 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL078604.1-201ENST00000404609 466 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL355379.1-201ENST00000405542 640 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU2-28P-201ENST00000410457 189 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 PIGPP2-201ENST00000411569 458 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 MTCYBP38-201ENST00000417160 1123 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 TMBIM7P-201ENST00000418074 855 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 CRIP1P1-201ENST00000427567 185 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL7P56-201ENST00000429441 717 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC244035.1-201ENST00000430042 390 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL596266.1-201ENST00000448132 400 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL5P22-201ENST00000480199 884 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SL447P-201ENST00000494711 245 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL30P11-201ENST00000495304 339 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ARL4AP1-201ENST00000503220 705 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC112198.1-201ENST00000505369 1220 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU6-583P-201ENST00000516012 92 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RNA5SP228-201ENST00000516232 133 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC106038.2-201ENST00000520706 568 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AP006245.2-201ENST00000522004 300 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC126177.5-201ENST00000549599 178 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC023161.2-201ENST00000551218 780 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL390334.1-201ENST00000556395 450 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 SULT1C2P1-202ENST00000562418 459 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR4700-201ENST00000578311 74 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR4311-201ENST00000580794 100 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL513327.3-201ENST00000602618 469 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092653.1-201ENST00000608509 531 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 RPSAP73-201ENST00000614820 330 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC008083.4-201ENST00000615076 444 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AL118522.2-201ENST00000616045 615 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC091965.5-201ENST00000624785 342 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU1-85P-201ENST00000364127 164 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SKP6-201ENST00000364795 319 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC005042.1-201ENST00000393397 800 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL11P3-201ENST00000395256 523 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AL133270.1-201ENST00000402635 279 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SKP273-201ENST00000411392 314 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 GPS2P1-201ENST00000411761 986 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AL390774.1-201ENST00000411924 246 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AL133384.1-201ENST00000412744 351 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL35AP24-201ENST00000413846 330 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 CEACAMP8-201ENST00000413902 580 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 SDCBPP2-201ENST00000424643 885 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 OR6D1P-201ENST00000436165 939 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms