Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC093716.1-201ENST00000435923 377 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 MTCYBP29-201ENST00000436327 1006 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 ELOCP10-201ENST00000440624 327 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 H2AFZP6-201ENST00000444403 394 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 IFNWP4-201ENST00000453148 294 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RAD23BP3-201ENST00000454157 1152 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 TPRKBP1-201ENST00000456243 481 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 UQCRHP4-201ENST00000471686 272 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 OR52A4P-202ENST00000481634 799 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC010342.1-201ENST00000514047 877 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC034244.2-201ENST00000514668 858 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RNA5SP519-201ENST00000516480 119 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC063950.1-201ENST00000552036 308 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 TVP23BP1-201ENST00000557500 617 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 IPO5P1-202ENST00000600039 287 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL161729.3-201ENST00000603533 673 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 ELOCP34-201ENST00000604436 327 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC034236.3-201ENST00000605999 461 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL645927.2-201ENST00000618350 349 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC00216-201ENST00000623548 1126 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RPL23AP61-201ENST00000623642 466 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC092162.3-201ENST00000624511 1624 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC009313.2-201ENST00000417893 1941 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL445437.1-201ENST00000623157 3087 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC092079.1-201ENST00000558620 1985 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 SNORA37-201ENST00000384504 129 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 SEC63P1-201ENST00000425785 1258 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 RPL23AP4-201ENST00000427757 463 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 MTCO1P54-201ENST00000430139 712 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 BTF3P10-201ENST00000433415 495 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC073143.1-201ENST00000436316 395 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC041039.1-201ENST00000485656 536 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 FABP5P6-201ENST00000510588 409 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 ACTR6P1-201ENST00000514311 1104 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC087888.1-201ENST00000550884 1254 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC027176.2-201ENST00000559166 746 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC017076.1-201ENST00000607613 578 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC116447.1-201ENST00000613153 453 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 MIR8059-201ENST00000620427 81 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AP005264.7-201ENST00000625003 745 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 AC007342.7-201ENST00000624610 2337 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 CYP1D1P-201ENST00000416662 1433 ntBASIC3.78□□□□□ -1.8
TRAPPC4Q9Y296 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
TRAPPC4Q9Y296 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms