Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AL389895.1-201ENST00000554127 252 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 DUXAP1-201ENST00000556632 463 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 MTND3P12-201ENST00000559068 328 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 OR1F2P-201ENST00000570470 933 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 HNRNPCP4-201ENST00000571636 900 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 MIR4646-201ENST00000580775 63 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC107982.3-201ENST00000584957 985 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 DPRXP5-201ENST00000604662 539 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC133644.2-201ENST00000608142 540 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AL450489.1-201ENST00000612071 468 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC131238.1-201ENST00000617135 328 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC009704.2-201ENST00000618739 483 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC120349.2-201ENST00000625002 298 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.84□□□□□ -1.64
LRFN1Q9P244 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
LRFN1Q9P244 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
LRFN1Q9P244 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 RNU1-85P-201ENST00000364127 164 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 Y_RNA.311-201ENST00000365068 96 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC019155.1-201ENST00000382242 574 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 RN7SKP247-201ENST00000411094 308 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC006960.1-201ENST00000419980 153 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 RPL7P53-201ENST00000421245 739 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC009784.1-201ENST00000426484 460 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC008065.1-201ENST00000428525 348 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 VDAC1P6-201ENST00000430062 855 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 RPL7P34-201ENST00000433316 712 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 VN1R54P-201ENST00000435210 1049 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 MTND3P1-201ENST00000441336 220 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC092647.3-201ENST00000443044 633 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 VN1R40P-201ENST00000455196 941 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 MTCO3P2-201ENST00000457365 171 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC087385.1-201ENST00000475062 312 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC010587.2-201ENST00000511727 448 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC016065.2-201ENST00000514530 444 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC104057.1-201ENST00000515547 497 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 RNA5SP230-201ENST00000517039 122 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 MTND2P38-201ENST00000522536 667 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 OR5D15P-201ENST00000531671 942 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC125611.1-201ENST00000549563 229 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AGGF1P8-201ENST00000562979 1000 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC079171.1-201ENST00000568788 914 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC011447.4-201ENST00000587562 111 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC131235.4-201ENST00000609288 620 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC068722.2-201ENST00000618734 544 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC069209.1-201ENST00000619282 651 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC120349.3-201ENST00000624377 529 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC005618.4-201ENST00000625053 554 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC019226.2-201ENST00000625973 424 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRFN1Q9P244 MAPK10-328ENST00000641553 4009 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 AC100757.1-201ENST00000616872 1835 ntBASIC4.83□□□□□ -1.64
LRFN1Q9P244 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRFN1Q9P244 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
LRFN1Q9P244 AC008079.2-201ENST00000623543 20396 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 PCAT14-202ENST00000627127 3935 ntBASIC4.82□□□□□ -1.64
LRFN1Q9P244 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRFN1Q9P244 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms