Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC009963.2-201ENST00000453431 138 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC116533.1-201ENST00000459748 321 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC104164.3-201ENST00000467363 1258 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RPS17P11-201ENST00000474297 293 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC099522.1-202ENST00000514718 367 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MTND2P32-201ENST00000521584 1038 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 CIR1P1-201ENST00000524055 1133 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MTND1P24-201ENST00000552175 861 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MIR4443-201ENST00000585052 53 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC006116.5-201ENST00000591936 559 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RNU6-1192P-201ENST00000612197 107 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC114781.5-201ENST00000615297 108 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 RNU6-489P-201ENST00000618289 107 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AL512427.1-201ENST00000618593 349 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 AC006927.4-201ENST00000639187 543 ntBASIC4.46□□□□□ -1.7
SIX2Q9NPC8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SIX2Q9NPC8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RPS4XP9-201ENST00000405151 780 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC096533.1-201ENST00000411645 353 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 PGBD4P8-201ENST00000412993 562 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC245028.1-201ENST00000423259 256 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 PNRC2P1-201ENST00000423940 420 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 MTCO2P23-201ENST00000425216 680 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC068287.1-201ENST00000430283 295 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC023512.1-201ENST00000444513 499 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC069277.2-201ENST00000454211 432 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AP000942.1-201ENST00000463969 747 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RPL5P30-201ENST00000465511 891 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RN7SL303P-201ENST00000469773 251 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RN7SL481P-201ENST00000477764 299 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 HMGB1P38-201ENST00000490557 577 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 RNU7-143P-201ENST00000516781 65 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 IGKV2-38-201ENST00000517443 247 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC008126.1-201ENST00000549019 480 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 DUX4L52-201ENST00000549363 777 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AL390334.1-201ENST00000556395 450 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 TVP23BP1-201ENST00000557500 617 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC233280.2-201ENST00000603917 1070 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 SUMO2P14-201ENST00000604488 293 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC009237.17-201ENST00000618111 748 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AP005264.7-201ENST00000625003 745 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 AC007342.7-201ENST00000624610 2337 ntBASIC4.45□□□□□ -1.7
SIX2Q9NPC8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SIX2Q9NPC8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC116667.1-201ENST00000604855 2072 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 HSPD1P11-201ENST00000508643 1702 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RNU5E-10P-201ENST00000363506 118 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC234772.1-201ENST00000377927 937 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RNU6-207P-201ENST00000384137 107 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MT-TP-201ENST00000387461 68 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms