Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC083899.1-201ENST00000454465 3819 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 Y_RNA.138-201ENST00000363462 102 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 SNORA5.1-201ENST00000384275 131 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 SNORA7A-201ENST00000384765 139 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL096829.1-201ENST00000413677 457 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 NMD3P2-201ENST00000421815 761 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RPL7AP14-201ENST00000424041 802 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL035410.1-201ENST00000427409 427 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 RPL23AP19-201ENST00000436229 369 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RPL7P54-201ENST00000438336 674 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC097359.1-201ENST00000447946 463 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC099563.1-201ENST00000456086 418 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC104164.1-201ENST00000460282 590 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC090142.1-201ENST00000465776 462 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RN7SL83P-201ENST00000468131 297 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RPL23AP71-201ENST00000470966 469 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC007537.2-201ENST00000472093 511 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RPL36AP51-201ENST00000487216 318 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 RNA5SP206-201ENST00000516703 121 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RNU6-1003P-201ENST00000517099 105 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 RN7SKP283-201ENST00000517197 270 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 HSPA8P13-201ENST00000523715 472 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 CYCSP25-201ENST00000525280 316 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AP001994.1-201ENST00000527539 826 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC022884.3-201ENST00000579571 248 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 MIR3671-201ENST00000580455 88 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC018638.8-201ENST00000588755 281 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 VN1R80P-201ENST00000597126 338 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AL360085.1-201ENST00000604713 532 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 COX6CP4-201ENST00000605798 228 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC068722.2-201ENST00000618734 544 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 AC026523.2-201ENST00000625039 7739 ntBASIC5.92□□□□□ -1.46
SSU72Q9NP77 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.92□□□□□ -1.46
SSU72Q9NP77 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSU72Q9NP77 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 RN7SKP145-201ENST00000363291 303 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 RNA5SP429-201ENST00000363688 109 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 RN7SKP78-201ENST00000364711 318 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 RNU1-136P-201ENST00000384181 164 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms