Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM39Q9HCM9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC103591.2-201ENST00000265259 766 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MIR323A-201ENST00000362199 86 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 Y_RNA.6-201ENST00000362350 114 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RN7SKP269-201ENST00000365545 319 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RNU1-136P-201ENST00000384181 164 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC025750.1-201ENST00000399891 379 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RN7SKP206-201ENST00000410823 293 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 UBTFL3-201ENST00000418934 1024 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RPS27AP14-201ENST00000422868 454 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AL391987.1-201ENST00000441025 200 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RPS26P56-201ENST00000444468 240 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 VN1R10P-201ENST00000447106 875 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC239367.2-201ENST00000447309 705 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MTCO3P2-201ENST00000457365 171 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC023141.9-201ENST00000458734 412 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 UBTFL6-201ENST00000477929 1024 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RN7SL717P-201ENST00000478343 297 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 RNU6-150P-201ENST00000516237 95 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 OR4A45P-201ENST00000529954 901 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AP002453.2-201ENST00000533503 320 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MIR4311-201ENST00000580794 100 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC011445.2-201ENST00000599274 173 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC091805.2-201ENST00000603848 235 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC112187.2-201ENST00000604345 283 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC010200.2-201ENST00000605098 235 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AL022394.1-201ENST00000606979 292 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC116447.1-201ENST00000613153 453 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC138932.5-201ENST00000617759 563 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 MIR4302-201ENST00000638058 60 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM39Q9HCM9 AC092447.7-201ENST00000422212 1621 ntBASIC5.59□□□□□ -1.52
TRIM39Q9HCM9 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM39Q9HCM9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 MTND4P16-201ENST00000466108 1367 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 RNA5SP453-201ENST00000362503 119 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 RNU6-984P-201ENST00000363236 109 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 SNORA75-201ENST00000384158 137 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 RNU6-517P-201ENST00000384362 110 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AL133384.1-201ENST00000412744 351 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AL139128.1-201ENST00000413921 941 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 OR6E1P-201ENST00000414424 923 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 UBE2V1P10-201ENST00000414685 269 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 IPMKP1-201ENST00000425988 855 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AL158073.1-201ENST00000426848 1104 ntBASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM39Q9HCM9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms