Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 OR8G3P-201ENST00000533406 921 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AP005403.1-201ENST00000579720 229 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 MIR1273E-201ENST00000581165 102 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 RSL24D1P11-201ENST00000591045 491 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC103881.1-201ENST00000603476 538 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC087283.1-201ENST00000604029 1074 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC015914.2-201ENST00000618167 288 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC018926.3-201ENST00000618841 406 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 CU639417.4-201ENST00000623928 207 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.82□□□□□ -1.64
SNX18Q96RF0 CASC19-204ENST00000641001 2055 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNX18Q96RF0 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
SNX18Q96RF0 ZNF833P-201ENST00000424938 1494 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 RN7SKP124-201ENST00000364730 341 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 Y_RNA.408-201ENST00000383987 102 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 MT-TH-201ENST00000387441 69 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 RNU6-920P-201ENST00000410926 92 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 MTCO3P41-201ENST00000414801 328 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 CYCSP10-201ENST00000417973 294 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 BRWD1P3-201ENST00000428816 390 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 PPIAP17-201ENST00000438507 471 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 COX6CP18-201ENST00000448769 222 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 RPL12P26-201ENST00000452430 487 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC002553.2-201ENST00000453217 340 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 CCDC75P1-201ENST00000469247 791 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 RN7SL184P-201ENST00000488308 297 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC147055.4-201ENST00000504399 745 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 DSTNP2-201ENST00000504533 515 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 BX510359.5-201ENST00000515651 304 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 RNA5SP360-201ENST00000516555 118 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC092851.1-201ENST00000535964 478 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC005341.1-201ENST00000571086 708 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 MIR4443-201ENST00000585052 53 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AP000769.2-201ENST00000602344 396 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC004987.4-201ENST00000603383 338 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL592221.1-201ENST00000605266 382 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL139286.2-201ENST00000606838 396 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC104073.3-201ENST00000610942 955 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 MIR6839-201ENST00000620425 113 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AL359715.5-201ENST00000623431 443 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 AP000648.2-201ENST00000624182 404 ntBASIC4.81□□□□□ -1.64
SNX18Q96RF0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX18Q96RF0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNX18Q96RF0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNX18Q96RF0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms