Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 AC093311.1-201ENST00000506586 2021 ntBASIC4.32□□□□□ -1.72
RPRD1AQ96P16 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPRD1AQ96P16 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AL512504.1-201ENST00000415494 778 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC108032.1-201ENST00000416706 207 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC073464.3-201ENST00000422564 712 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC079804.1-201ENST00000461922 436 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 MTCO1P35-201ENST00000515270 228 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 MIR4512-201ENST00000583257 77 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 SS18L2P2-201ENST00000583960 235 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC110743.1-201ENST00000584870 478 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC135803.1-201ENST00000608748 565 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC074276.2-201ENST00000619891 348 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC090506.2-201ENST00000624521 419 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
RPRD1AQ96P16 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RPRD1AQ96P16 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 MFSD8-220ENST00000641243 1422 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL022722.2-201ENST00000402519 180 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC114755.5-201ENST00000447760 831 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AP002345.1-201ENST00000456493 928 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC016550.3-201ENST00000515706 767 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC135001.1-201ENST00000544546 283 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC008083.2-201ENST00000546707 476 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 RN7SL600P-201ENST00000581811 299 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 OR1AB1P-201ENST00000585564 761 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 VN1R84P-201ENST00000593697 235 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL731566.2-201ENST00000618971 317 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 AC017002.4-201ENST00000604721 1525 ntBASIC4.3□□□□□ -1.72
RPRD1AQ96P16 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPRD1AQ96P16 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RPRD1AQ96P16 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms