Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AP003730.1-201ENST00000524605 285 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AL109741.3-201ENST00000561748 592 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AC244505.7-201ENST00000599675 272 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 AL137849.1-201ENST00000604767 169 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AL445437.1-201ENST00000623157 3087 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC42Q96M95 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 CASC19-261ENST00000641853 1638 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC007342.7-201ENST00000624610 2337 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC007529.1-201ENST00000418574 2178 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 RNA5SP443-201ENST00000363083 132 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 MIR199A2-201ENST00000385289 110 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 MT-RNR1-201ENST00000389680 954 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 Z98941.1-201ENST00000407764 100 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AL365396.1-201ENST00000430854 671 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AL356276.2-201ENST00000435919 558 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 TBCAP1-201ENST00000436520 327 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 CYCSP42-201ENST00000450823 238 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 OR52Y1P-201ENST00000452418 828 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 RPS29P33-201ENST00000456717 146 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 RPS3AP6-201ENST00000484430 795 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC138701.1-201ENST00000524329 714 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 MIR3138-201ENST00000585238 82 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 ARF4P1-201ENST00000605447 541 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 OR5AC4P-202ENST00000642086 985 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC42Q96M95 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC42Q96M95 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
CCDC42Q96M95 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 MTND4LP13-201ENST00000425022 298 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 RPL12P46-201ENST00000436610 195 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 NIPA2P2-201ENST00000496376 1083 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC108941.1-201ENST00000502853 530 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 NPM1P47-201ENST00000560843 856 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC018552.3-201ENST00000567416 561 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 MTND2P13-201ENST00000577438 1039 ntBASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC42Q96M95 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC42Q96M95 AC009951.1-201ENST00000623674 2614 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 XIAPP3-201ENST00000312918 795 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC42Q96M95 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 AL136131.1-201ENST00000406079 803 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC42Q96M95 RNU4-6P-201ENST00000410804 122 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.11□□□□□ -1.75
CCDC42Q96M95 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms