Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC087241.2-201ENST00000535801 324 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 DPPA3P3-201ENST00000603842 430 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC009597.2-201ENST00000604659 592 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC008555.7-201ENST00000605008 583 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 AL591167.1-201ENST00000607321 456 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 AP004607.9-201ENST00000618202 316 ntBASIC6.53□□□□□ -1.36
TRIM11Q96F44 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM11Q96F44 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM11Q96F44 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM11Q96F44 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TRIM11Q96F44 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.52□□□□□ -1.36
TRIM11Q96F44 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC067945.1-201ENST00000342609 618 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 SNORD1C-201ENST00000363315 78 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 RNU6-510P-201ENST00000391239 108 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AL162578.1-201ENST00000406202 378 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 SNRPFP1-201ENST00000414761 252 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AL034379.1-201ENST00000423216 253 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC094019.1-201ENST00000434678 472 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 COX6CP18-201ENST00000448769 222 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AL133351.3-201ENST00000454998 193 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 KLHL2P1-201ENST00000508691 521 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC090958.1-201ENST00000511122 351 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 MTCO2P24-201ENST00000515611 426 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 SNORA74.1-201ENST00000516320 180 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 RNA5SP206-201ENST00000516703 121 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 Y_RNA.710-201ENST00000516975 110 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 ZNF322P1-201ENST00000568013 1209 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 MIR3157-201ENST00000578688 85 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 MIR132-201ENST00000591554 101 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC010591.1-201ENST00000603941 649 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC115286.1-201ENST00000604298 434 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC104237.2-201ENST00000612456 443 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 RFPL4AP6-201ENST00000616792 846 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC069234.4-201ENST00000621276 412 ntBASIC6.52□□□□□ -1.37
TRIM11Q96F44 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM11Q96F44 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
TRIM11Q96F44 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM11Q96F44 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM11Q96F44 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM11Q96F44 AC020656.2-201ENST00000613291 5309 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM11Q96F44 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 AC007842.1-201ENST00000597336 2039 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 OR56A4-201ENST00000330728 1209 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 RNU6-462P-201ENST00000362659 105 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 U8.3-201ENST00000363321 132 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 Y_RNA.188-201ENST00000363952 111 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM11Q96F44 SNORA22B-201ENST00000383876 138 ntBASIC6.51□□□□□ -1.37
TRIM11Q96F44 RNU6-533P-201ENST00000384144 107 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms