Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 PTP4A1P6-201ENST00000531034 478 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC126177.5-201ENST00000549599 178 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AL121576.1-201ENST00000556055 276 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 HMGN1P26-201ENST00000558737 303 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 CYP2C60P-201ENST00000566088 139 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC091304.5-201ENST00000568969 158 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC011447.4-201ENST00000587562 111 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC027243.2-201ENST00000602530 724 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AP003117.1-201ENST00000602771 554 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AL512782.1-201ENST00000603093 364 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC005034.4-201ENST00000603612 899 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC016877.3-201ENST00000606778 504 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC109309.2-201ENST00000612597 332 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 FO681491.1-202ENST00000623392 737 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 AC011493.1-201ENST00000596753 1632 ntBASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
SPTSSBQ8NFR3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC007256.1-201ENST00000392253 2765 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL080312.1-201ENST00000256654 824 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SNORA7.2-201ENST00000364446 145 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SNORA73.2-201ENST00000364946 201 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RNU6-805P-201ENST00000365643 106 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RNU6-356P-201ENST00000384140 107 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SNORA70E-201ENST00000384492 135 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 GSTA12P-201ENST00000402398 508 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 HSPE1P8-201ENST00000406997 288 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 EI24P1-201ENST00000416584 867 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 MTND4P11-201ENST00000417020 1058 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 MTND2P15-201ENST00000418575 892 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RPL21P40-201ENST00000428586 483 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC007563.3-201ENST00000433233 371 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SLC25A24P1-202ENST00000434803 1220 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC009969.1-201ENST00000438726 172 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL390119.1-201ENST00000440329 312 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL512326.1-201ENST00000443050 721 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SSXP4-201ENST00000451349 245 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RANP1-206ENST00000455094 651 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RPL23AP56-201ENST00000460778 453 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RPL21P8-201ENST00000465083 535 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RN7SL283P-201ENST00000489055 303 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC140172.1-201ENST00000502928 141 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC026726.1-201ENST00000512859 601 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 BX510359.5-201ENST00000515651 304 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RNU2-45P-201ENST00000516068 187 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RN7SKP21-201ENST00000516503 220 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RN7SKP83-201ENST00000516512 178 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RNA5SP380-201ENST00000517190 98 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 IGKV2D-19-201ENST00000523346 262 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AP004607.5-201ENST00000532034 217 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC006064.5-201ENST00000541782 248 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL109653.1-201ENST00000603091 248 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC005840.5-201ENST00000619166 599 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AL139089.1-201ENST00000620372 975 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AC116563.2-201ENST00000624751 535 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 5S_rRNA.29-201ENST00000641250 107 ntBASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
SPTSSBQ8NFR3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms