Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AL158163.1-201ENST00000603915 1649 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 SNORA60-201ENST00000362396 134 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 RPL23AP59-201ENST00000399415 461 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 RN7SKP263-201ENST00000411194 309 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC099063.2-201ENST00000446360 662 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC007537.2-201ENST00000472093 511 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 SNORD39.2-201ENST00000579995 76 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC068724.3-201ENST00000625906 87 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC112Q8NEF3 AC007342.7-201ENST00000624610 2337 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 PRO1804-201ENST00000623780 2050 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 RPS26P8-201ENST00000393490 348 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 HSPE1P8-201ENST00000406997 288 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 MIR1193-201ENST00000408109 78 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 RPL21P109-201ENST00000422213 475 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC007064.3-201ENST00000422608 359 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 FHP1-201ENST00000442741 703 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AL035551.1-201ENST00000446931 348 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AL109741.3-201ENST00000561748 592 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC011477.5-201ENST00000586571 259 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AL390816.3-201ENST00000604527 1066 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 BRDTP1-201ENST00000605735 677 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC068831.8-201ENST00000620171 435 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 OR52H1-202ENST00000641796 1061 ntBASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC112Q8NEF3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 NRBF2P2-201ENST00000413087 861 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC099336.2-201ENST00000422457 254 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 RPS27AP12-201ENST00000429552 465 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 RPS29P17-201ENST00000430795 166 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC099560.2-201ENST00000457554 255 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 MTCO1P35-201ENST00000515270 228 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AL121576.1-201ENST00000556055 276 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 ARF4P1-201ENST00000605447 541 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC006946.3-201ENST00000609791 756 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC004241.3-201ENST00000611728 517 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 AC022960.2-201ENST00000616300 666 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC112Q8NEF3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms