Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC027514.1-201ENST00000588561 1603 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC000367.1-201ENST00000452711 1766 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC011503.2-201ENST00000594230 1500 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 OR9G4-201ENST00000302957 984 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 U3.28-201ENST00000391249 210 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 BX323845.1-201ENST00000432417 179 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MTCYBP34-201ENST00000439552 670 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MTATP6P23-201ENST00000440153 476 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MED28P3-201ENST00000444288 531 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 NOP56P2-201ENST00000447491 769 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC091959.2-201ENST00000477363 321 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 RPL7P41-201ENST00000485823 957 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC104971.1-201ENST00000495117 578 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 ARL4AP1-201ENST00000503220 705 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 RN7SKP276-201ENST00000516242 268 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 Y_RNA.695-201ENST00000516715 107 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 HIGD1AP10-201ENST00000527837 282 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC011260.1-201ENST00000578420 472 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC009509.4-201ENST00000619202 509 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC009878.1-201ENST00000621819 340 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC015804.1-201ENST00000622935 435 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC021106.3-201ENST00000623925 531 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MIR4278-201ENST00000636094 69 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 RN7SKP153-201ENST00000365026 316 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 RNU6-1215P-201ENST00000384441 102 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 RNU2-16P-201ENST00000410712 136 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 RPS27AP7-201ENST00000422792 455 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 RPL21P43-201ENST00000425440 472 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 CENPIP1-201ENST00000425713 902 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 CNOT7P1-201ENST00000429006 852 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 FTLP19-201ENST00000433300 394 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC097499.1-201ENST00000444277 208 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL929288.2-201ENST00000446368 407 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 TCEA1P1-201ENST00000449716 880 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL161747.1-201ENST00000480068 358 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC011825.1-201ENST00000484967 388 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AP000619.3-201ENST00000535634 1127 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AP001880.2-201ENST00000538233 448 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms