Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 IGKV2D-10-201ENST00000520194 281 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 OR4R2P-201ENST00000530815 597 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC107918.3-201ENST00000533272 382 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC022884.3-201ENST00000579571 248 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 MIR4697-201ENST00000582977 78 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC027228.2-201ENST00000567141 2154 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AP000756.2-201ENST00000624168 2567 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 HMGB1P10-201ENST00000395823 563 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 RNU2-17P-201ENST00000410290 190 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC105402.1-201ENST00000413336 545 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 XKRYP4-201ENST00000414395 483 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 COX6CP15-201ENST00000426313 211 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 EIF2S2P3-201ENST00000428356 999 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 MTCO1P52-201ENST00000433928 531 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 RPL23AP46-201ENST00000438548 490 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 RPL34P26-201ENST00000445636 354 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 XKRYP5-201ENST00000449659 483 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC243772.1-201ENST00000451620 410 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP246-201ENST00000458909 119 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC025884.1-201ENST00000556034 378 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 PARP1P2-201ENST00000556806 195 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 NPM1P47-201ENST00000560843 856 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC136624.4-201ENST00000573044 370 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 RN7SL600P-201ENST00000581811 299 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC006116.5-201ENST00000591936 559 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AL139395.1-201ENST00000603662 160 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AP001033.2-201ENST00000609701 1003 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC007342.8-201ENST00000623278 678 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC106730.3-201ENST00000624568 641 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf40Q8IXQ3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC087190.4-201ENST00000574616 8334 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AL121657.1-201ENST00000327215 531 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP52-201ENST00000362448 134 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RNU6-252P-201ENST00000363232 107 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RHOT1P2-201ENST00000366423 333 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RNU6-452P-201ENST00000384406 107 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RNU6-185P-201ENST00000384421 107 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 SNORA70C-201ENST00000384538 135 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AP000949.1-201ENST00000438328 629 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RPL7P48-201ENST00000461513 746 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms