Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RNA5SP333-201ENST00000363466 118 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RNA5SP334-201ENST00000364825 118 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RN7SKP226-201ENST00000364912 300 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 Y_RNA.296-201ENST00000364930 108 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RNU6-769P-201ENST00000384407 104 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RNU6-178P-201ENST00000384631 104 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 USP9YP6-201ENST00000413550 854 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RAD23BP1-201ENST00000421404 1227 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 MTCO2P5-201ENST00000422621 426 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 OR8F1P-201ENST00000425243 930 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC105402.2-201ENST00000438503 358 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AL662791.1-201ENST00000441992 928 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AL022237.1-201ENST00000446663 358 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 USP9YP34-201ENST00000453983 808 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RPL9P6-201ENST00000492764 598 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 MTCO2P4-201ENST00000517968 247 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AP005639.1-201ENST00000526939 192 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 FGF7P1-201ENST00000582820 288 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC103792.1-201ENST00000603591 919 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 RPL23AP92-201ENST00000603609 255 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC098614.4-201ENST00000607601 462 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AL139099.4-201ENST00000614802 114 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 TCL6_3.1-201ENST00000619064 137 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 AC069234.4-201ENST00000621276 412 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 CYP3A51P-201ENST00000633513 256 ntBASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS4Q8IUM7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 FARSBP1-201ENST00000435808 1778 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RNU6-952P-201ENST00000391164 108 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 DHFRP6-201ENST00000401776 268 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 Y_RNA.608-201ENST00000410647 95 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL357752.1-201ENST00000412817 349 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 USP9YP18-201ENST00000425912 695 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RPS26P47-201ENST00000427219 348 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 BX890604.2-201ENST00000427883 474 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 USP12PX-201ENST00000432383 1057 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL353597.2-202ENST00000434901 373 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 HSPE1P28-201ENST00000443139 211 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MTATP6P30-201ENST00000443540 664 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL163193.1-201ENST00000444895 788 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 VDAC2P4-201ENST00000452925 711 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 UBDP1-202ENST00000457888 382 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL121769.1-201ENST00000469473 401 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RPL31P50-201ENST00000471002 296 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC034222.1-201ENST00000494052 532 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC108941.1-201ENST00000502853 530 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RNU6-430P-201ENST00000517078 107 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 IGBP1P1-201ENST00000554337 1009 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms