Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC005363.1-201ENST00000530779 351 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 MRPS21P7-201ENST00000566937 238 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC135628.1-201ENST00000568867 534 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC068722.2-201ENST00000618734 544 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 BX005214.3-202ENST00000619809 325 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AP003399.1-201ENST00000637534 361 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC053481.2-202ENST00000582394 1500 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 AC087359.1-201ENST00000508335 1740 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ASNSP1-201ENST00000518311 1939 ntBASIC5.05□□□□□ -1.6
RNF220Q5VTB9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RNF220Q5VTB9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RN7SKP6-201ENST00000364795 319 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RNU6-657P-201ENST00000383904 107 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RNU1-149P-201ENST00000390870 161 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL512430.2-201ENST00000406786 339 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RN7SKP125-201ENST00000410481 302 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 USP9YP33-201ENST00000412220 421 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RPL12P17-201ENST00000432393 498 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 USP9YP35-201ENST00000435696 412 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 RPL23AP16-201ENST00000441715 421 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 HMGN1P2-201ENST00000445197 310 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 HMGB3P21-201ENST00000452483 547 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC109464.1-201ENST00000511091 819 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 SNORA43.3-201ENST00000517240 103 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 CYCSP22-201ENST00000517555 339 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC124068.1-201ENST00000563131 678 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC012616.1-201ENST00000600294 197 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL163642.2-201ENST00000604722 1019 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AP000894.4-201ENST00000610185 483 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AL354976.1-201ENST00000613843 387 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 MIR8069-1-201ENST00000616627 86 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 MIR8069-2-201ENST00000621412 86 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC073869.8-201ENST00000641806 335 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 AC114786.1-201ENST00000512892 1415 ntBASIC5.04□□□□□ -1.6
RNF220Q5VTB9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF220Q5VTB9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms