Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 NMNAT1P2-201ENST00000435192 860 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 QTRT1P1-201ENST00000604344 1078 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AL139089.1-201ENST00000620372 975 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AC093829.1-201ENST00000506662 1618 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AL365440.1-201ENST00000436135 2167 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 RNA5SP50-201ENST00000363731 107 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 SNORA80A-201ENST00000363922 136 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AL592291.1-201ENST00000403830 352 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AL078604.1-201ENST00000404609 466 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 RNU4-64P-201ENST00000410795 131 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 PCA3_2.1-201ENST00000612507 409 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 SNX18P3-202ENST00000565670 1750 ntBASIC3.7□□□□□ -1.82
RIF1Q5UIP0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 NAMPTP1-201ENST00000440465 2514 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 RPL26P28-201ENST00000451325 435 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AP001273.1-201ENST00000624493 3152 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AL451007.1-201ENST00000595491 289 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AL034408.1-201ENST00000637712 664 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 AC104623.2-202ENST00000623477 4002 ntBASIC3.69□□□□□ -1.82
RIF1Q5UIP0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RIF1Q5UIP0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 U3.19-201ENST00000390893 196 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AL354760.1-201ENST00000608357 643 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC109446.4-201ENST00000623235 2755 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 RNU6-729P-201ENST00000384399 107 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 OR1AA1P-201ENST00000419597 916 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 RPL32P28-201ENST00000443577 397 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.68□□□□□ -1.82
RIF1Q5UIP0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RIF1Q5UIP0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 ZNF826P-207ENST00000622273 1910 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 BMS1P3-201ENST00000372011 932 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 RPL7AP73-201ENST00000413490 353 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC103783.1-201ENST00000520506 373 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC006116.10-201ENST00000591836 581 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AL390838.2-201ENST00000602394 274 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AP003392.5-201ENST00000607857 415 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms