Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC022431.1-201ENST00000450941 438 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 GAPDHP39-201ENST00000481866 979 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RPS3AP22-201ENST00000488297 769 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RPL23AP72-201ENST00000492447 435 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 C1GALT1P3-201ENST00000522049 819 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC090819.1-201ENST00000523800 1111 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AP000926.4-201ENST00000527351 454 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 PDCL2P2-201ENST00000533651 189 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC109446.2-201ENST00000567872 497 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC068790.4-201ENST00000602474 263 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 MRPS35P3-201ENST00000603189 709 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL137072.1-201ENST00000603444 466 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 MEMO1P5-201ENST00000604810 406 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AP003400.3-201ENST00000624904 346 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 SCARNA15-201ENST00000607520 4325 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC079097.1-201ENST00000512187 1399 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC000123.3-201ENST00000624029 4975 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 MIR16-1-201ENST00000385271 89 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 Z97832.1-201ENST00000402490 328 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PPIAP9-201ENST00000403866 498 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 RAP1BP1-201ENST00000412709 553 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PTP4A1P5-201ENST00000420305 455 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 GTF2IP23-201ENST00000423746 351 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL589823.1-201ENST00000429577 183 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 MTND1P20-201ENST00000430341 950 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 RPS24P8-201ENST00000431490 402 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 KCTD10P1-201ENST00000434203 625 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 COX6CP18-201ENST00000448769 222 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 OR52J1P-201ENST00000450596 932 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 MTND1P27-201ENST00000451117 902 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC234781.3-201ENST00000452540 973 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 RPL23AP71-201ENST00000470966 469 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC104971.1-201ENST00000495117 578 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC093755.1-201ENST00000512950 1023 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC010198.2-201ENST00000550612 259 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC108738.1-201ENST00000603703 237 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC104687.2-201ENST00000604442 342 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL158042.1-201ENST00000605338 460 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC010632.3-201ENST00000611377 369 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC013562.2-201ENST00000611632 603 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC018926.3-201ENST00000618841 406 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC067852.7-201ENST00000623270 535 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC016717.3-201ENST00000624730 554 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AL049536.1-201ENST00000625043 744 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms