Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 H3F3AP3-201ENST00000497682 407 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC018645.1-201ENST00000505003 109 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ZNF519P4-201ENST00000514008 125 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RNU6-273P-201ENST00000516937 96 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 DEFB131D-201ENST00000526803 184 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 SLC2A13P1-201ENST00000531560 322 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC023157.2-201ENST00000540596 141 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RPL3P13-201ENST00000550415 216 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC015818.6-201ENST00000584274 634 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 TPMTP1-201ENST00000592307 737 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC011445.2-201ENST00000599274 173 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AL121612.2-201ENST00000612261 482 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 MKKS-204ENST00000639674 192 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC105114.1-201ENST00000624795 1862 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 FAM32BP-201ENST00000344033 333 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.150-201ENST00000363562 102 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.288-201ENST00000364854 92 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RNU6-77P-201ENST00000410554 91 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RPL37P10-201ENST00000412884 288 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 CHEK2P5-201ENST00000423877 246 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC073335.1-201ENST00000427776 363 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 OR2AS1P-201ENST00000427827 319 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC007559.1-201ENST00000428736 355 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 FABP7P2-201ENST00000429946 379 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 PNKDP1-201ENST00000435914 430 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 LSM1P1-201ENST00000438629 273 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 OR13K1P-201ENST00000444577 975 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 COX4I1P2-201ENST00000447446 547 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 DNAJC19P8-201ENST00000452887 259 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RNU7-63P-201ENST00000459054 62 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 MED28P2-201ENST00000475771 317 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC090638.1-201ENST00000498296 909 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 HIGD1AP14-201ENST00000507617 282 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.661-201ENST00000516003 99 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RNU6-182P-201ENST00000516970 105 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC025260.1-201ENST00000548858 430 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 MIR3128-201ENST00000581957 66 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 RNF138P2-201ENST00000603490 592 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC109309.2-201ENST00000612597 332 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC104837.1-201ENST00000444644 1587 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 AL121949.2-201ENST00000403446 1548 ntBASIC7.06□□□□□ -1.28
CTC1Q2NKJ3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms