Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL500527.1-201ENST00000448532 255 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 HSPE1P22-201ENST00000456856 327 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 PPM1AP1-201ENST00000502740 1135 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 MTCYBP19-201ENST00000517463 1124 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC022968.1-201ENST00000567372 442 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 MIR5685-201ENST00000579080 79 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 MIR3158-1-201ENST00000583596 81 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.73□□□□□ -1.65
GABPAQ06546 AL392048.1-201ENST00000613946 534 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AP001005.3-201ENST00000622049 129 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC092435.4-201ENST00000623012 4159 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
GABPAQ06546 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
GABPAQ06546 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
GABPAQ06546 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GABPAQ06546 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.72□□□□□ -1.65
GABPAQ06546 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 MTND4LP14-201ENST00000429447 288 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 AL445584.1-201ENST00000431451 330 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 MTCO3P43-201ENST00000440974 771 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 Z95327.1-201ENST00000446082 482 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
GABPAQ06546 CALM1P2-201ENST00000452941 448 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.72□□□□□ -1.65
GABPAQ06546 HMGB1P3-201ENST00000502802 616 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 MTND4LP31-201ENST00000514859 294 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 RPS27AP18-201ENST00000515536 459 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 RNU6-352P-201ENST00000516908 107 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 AC023632.4-201ENST00000517783 191 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.72□□□□□ -1.65
GABPAQ06546 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.72□□□□□ -1.65
GABPAQ06546 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.72□□□□□ -1.65
GABPAQ06546 AC068020.1-201ENST00000594215 661 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 AL031666.3-201ENST00000609320 1006 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 AC090912.3-201ENST00000609775 533 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 MIR7154-201ENST00000620673 73 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 AL356863.1-201ENST00000623378 1080 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
GABPAQ06546 MARK2P15-201ENST00000432204 2186 ntBASIC4.72□□□□□ -1.65
GABPAQ06546 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GABPAQ06546 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.72□□□□□ -1.65
GABPAQ06546 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
GABPAQ06546 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GABPAQ06546 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GABPAQ06546 AC017104.4-201ENST00000636283 1592 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GABPAQ06546 AC009501.3-201ENST00000605001 1352 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 IL6STP1-201ENST00000346911 1020 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 SNORD35B-201ENST00000363660 87 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.71□□□□□ -1.66
GABPAQ06546 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.71□□□□□ -1.66
GABPAQ06546 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.71□□□□□ -1.66
GABPAQ06546 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GABPAQ06546 FABP3P2-201ENST00000453169 399 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 OR9M1P-201ENST00000459641 921 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC037198.2-201ENST00000478845 733 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC093770.1-201ENST00000511559 571 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 TCP11X3P-202ENST00000514289 1254 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 RNA5SP179-201ENST00000517284 121 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 IGHV3-63-201ENST00000518422 341 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 HMGB1P46-201ENST00000520062 610 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC087369.1-201ENST00000520775 996 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 MIR4444-1-201ENST00000581696 74 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 MIR4444-2-201ENST00000584390 74 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AP004372.1-201ENST00000604842 844 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AC091167.4-201ENST00000605079 184 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC006133.1-201ENST00000617106 264 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 AL121890.2-201ENST00000617644 465 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.71□□□□□ -1.66
GABPAQ06546 AC091948.2-201ENST00000636510 279 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 OR8B1P-202ENST00000641132 1178 ntBASIC4.71□□□□□ -1.66
GABPAQ06546 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.71□□□□□ -1.66
GABPAQ06546 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms