Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC105105.5-201ENST00000622635 1294 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 AL445437.1-201ENST00000623157 3087 ntBASIC3.6□□□□□ -1.83
H3F3AP84243 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.6□□□□□ -1.83
H3F3AP84243 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3F3AP84243 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
H3F3AP84243 RLIMP1-201ENST00000339626 1680 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3AP84243 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
H3F3AP84243 RN7SKP44-201ENST00000363602 316 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3AP84243 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3AP84243 SNORA3C-201ENST00000408792 125 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC073464.3-201ENST00000422564 712 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 RPS27AP12-201ENST00000429552 465 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 RPL7P4-203ENST00000430239 730 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.59□□□□□ -1.83
H3F3AP84243 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3AP84243 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC091390.1-201ENST00000433904 331 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 OR4C10P-201ENST00000434991 931 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 MTND2P25-201ENST00000449028 610 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AC106872.2-201ENST00000494303 480 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 RNU6-347P-201ENST00000516658 105 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC015911.5-201ENST00000587076 451 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.59□□□□□ -1.83
H3F3AP84243 AL451044.1-201ENST00000604867 238 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AC012603.1-201ENST00000606424 528 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.59□□□□□ -1.83
H3F3AP84243 AC095038.2-201ENST00000621464 1070 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.59□□□□□ -1.83
H3F3AP84243 CFTRP2-201ENST00000634304 199 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AL773545.4-201ENST00000637262 310 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 AL513478.4-201ENST00000641636 310 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
H3F3AP84243 Z82217.1-201ENST00000625157 8149 ntBASIC3.59□□□□□ -1.84
H3F3AP84243 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.59□□□□□ -1.84
H3F3AP84243 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
H3F3AP84243 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 PNPT1P2-201ENST00000456768 2050 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 MIR1251-201ENST00000408552 70 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 PPIAP17-201ENST00000438507 471 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 HSFY6P-201ENST00000445573 403 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 RPS11P1-201ENST00000451072 473 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 NUTF2P7-201ENST00000453086 375 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 RN7SL860P-201ENST00000473738 223 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AP000926.1-201ENST00000479573 241 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 RPL31P61-201ENST00000496160 376 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AC108064.1-201ENST00000513791 460 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.58□□□□□ -1.84
H3F3AP84243 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.58□□□□□ -1.84
H3F3AP84243 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 YPEL5P3-201ENST00000547227 352 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.58□□□□□ -1.84
H3F3AP84243 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 AC068020.1-201ENST00000594215 661 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
H3F3AP84243 AC007529.1-201ENST00000418574 2178 ntBASIC3.58□□□□□ -1.84
H3F3AP84243 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.58□□□□□ -1.84
H3F3AP84243 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3F3AP84243 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3F3AP84243 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3F3AP84243 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
H3F3AP84243 FAM35DP-201ENST00000323387 2712 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
H3F3AP84243 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3F3AP84243 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 RNA5SP239-201ENST00000410218 129 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC093084.1-201ENST00000424233 687 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 OR5BE1P-201ENST00000425977 939 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms