Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC012339.2-201ENST00000523996 453 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC090515.3-201ENST00000560431 315 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC009097.3-201ENST00000563557 1018 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AL354760.1-201ENST00000608357 643 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AP000255.1-201ENST00000610276 676 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AL596275.2-204ENST00000641628 552 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AL596275.2-206ENST00000641957 626 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 HSPA8P18-201ENST00000439846 1928 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC107081.3-201ENST00000612715 2034 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 ZNF876P-202ENST00000398732 1485 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 Z99496.1-201ENST00000469424 1477 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC000123.3-201ENST00000624029 4975 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 RNA5SP455-201ENST00000365190 119 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RNU6-444P-201ENST00000383988 108 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RNU1-106P-201ENST00000384382 164 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 SNORA70.10-201ENST00000384515 134 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 MIR765-201ENST00000390226 114 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AL133264.1-201ENST00000407157 562 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RNU4-34P-201ENST00000410431 124 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 BX510359.3-201ENST00000422168 306 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 RPL7P44-201ENST00000424827 742 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 MTATP6P17-201ENST00000431030 672 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 USP9YP22-201ENST00000438971 294 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AL450023.3-201ENST00000440592 271 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 OR7E125P-201ENST00000443450 846 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 TCEA1P1-201ENST00000449716 880 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC098826.2-201ENST00000452011 651 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC093166.2-201ENST00000455969 1017 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 GYG1P1-201ENST00000460864 698 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RN7SL799P-201ENST00000475891 298 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RN7SL177P-201ENST00000476596 299 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 BX284632.1-201ENST00000478218 541 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC109462.1-201ENST00000491087 368 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RPS4XP14-201ENST00000493072 781 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC104971.1-201ENST00000495117 578 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 MTCYBP35-201ENST00000503630 1137 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC025674.1-201ENST00000507074 324 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC093755.1-201ENST00000512950 1023 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC004980.4-201ENST00000513375 203 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC027308.1-201ENST00000517993 110 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC084757.1-201ENST00000559987 490 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC061975.8-201ENST00000587058 721 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC245036.5-201ENST00000596330 847 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC005191.1-201ENST00000603950 358 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC025588.2-201ENST00000604851 466 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC023158.2-201ENST00000614876 543 ntBASIC3.98□□□□□ -1.77
CX3CL1P78423 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CX3CL1P78423 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.98□□□□□ -1.77
CX3CL1P78423 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
CX3CL1P78423 MAPK10-320ENST00000641462 6696 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC120338.1-201ENST00000625074 1541 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms