Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AP004607.9-201ENST00000618202 316 ntBASIC3.12□□□□□ -1.91
CMC4P56277 AL445567.2-201ENST00000618935 498 ntBASIC3.12□□□□□ -1.91
CMC4P56277 AC112484.5-201ENST00000624189 228 ntBASIC3.12□□□□□ -1.91
CMC4P56277 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.12□□□□□ -1.91
CMC4P56277 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMC4P56277 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.12□□□□□ -1.91
CMC4P56277 RNF6P1-201ENST00000444889 1784 ntBASIC3.12□□□□□ -1.91
CMC4P56277 AC091046.3-201ENST00000631455 1574 ntBASIC3.12□□□□□ -1.91
CMC4P56277 AL139811.1-201ENST00000424779 2299 ntBASIC3.12□□□□□ -1.91
CMC4P56277 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.12□□□□□ -1.91
CMC4P56277 LARP1BP1-201ENST00000506036 1359 ntBASIC3.12□□□□□ -1.91
CMC4P56277 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.12□□□□□ -1.91
CMC4P56277 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMC4P56277 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 SAGE2P-201ENST00000420011 2126 ntBASIC3.11□□□□□ -1.91
CMC4P56277 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 DDX6P1-205ENST00000441966 1436 ntBASIC3.11□□□□□ -1.91
CMC4P56277 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.11□□□□□ -1.91
CMC4P56277 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CMC4P56277 SNORA70.2-201ENST00000364506 135 ntBASIC3.11□□□□□ -1.91
CMC4P56277 SNORA62.2-201ENST00000364672 152 ntBASIC3.11□□□□□ -1.91
CMC4P56277 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CMC4P56277 AL049693.1-201ENST00000402760 611 ntBASIC3.11□□□□□ -1.91
CMC4P56277 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 RNA5SP146-201ENST00000410743 123 ntBASIC3.11□□□□□ -1.91
CMC4P56277 RAB28P1-201ENST00000411517 641 ntBASIC3.11□□□□□ -1.91
CMC4P56277 EIF4EP1-201ENST00000422311 642 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 COX6CP15-201ENST00000426313 211 ntBASIC3.11□□□□□ -1.91
CMC4P56277 MRPL50P1-201ENST00000431951 384 ntBASIC3.11□□□□□ -1.91
CMC4P56277 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CMC4P56277 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 AL357520.1-201ENST00000441557 453 ntBASIC3.11□□□□□ -1.91
CMC4P56277 XKRY2-201ENST00000442362 1093 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.11□□□□□ -1.91
CMC4P56277 AC114755.5-201ENST00000447760 831 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 AC025181.1-201ENST00000477507 416 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.11□□□□□ -1.91
CMC4P56277 RN7SL604P-201ENST00000492589 296 ntBASIC3.11□□□□□ -1.91
CMC4P56277 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 AC010285.3-201ENST00000511668 676 ntBASIC3.11□□□□□ -1.91
CMC4P56277 RN7SKP122-201ENST00000515923 296 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 OR8G5-201ENST00000524943 1041 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.11□□□□□ -1.91
CMC4P56277 AC136624.4-201ENST00000573044 370 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC012417.1-201ENST00000582307 1039 ntBASIC3.11□□□□□ -1.91
CMC4P56277 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 AL354984.3-201ENST00000604803 325 ntBASIC3.11□□□□□ -1.91
CMC4P56277 ARF4P1-201ENST00000605447 541 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC090525.3-201ENST00000605601 189 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC017076.1-201ENST00000607613 578 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AL355816.1-201ENST00000607951 118 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC110792.4-201ENST00000609843 298 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AL445423.1-201ENST00000609941 536 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC005962.2-201ENST00000611427 652 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC023509.5-201ENST00000617434 807 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC007546.1-201ENST00000619452 559 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.11□□□□□ -1.91
CMC4P56277 AL669942.2-201ENST00000620352 697 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC138907.10-201ENST00000623708 983 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC090506.2-201ENST00000624521 419 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC024023.1-201ENST00000624530 922 ntBASIC3.11□□□□□ -1.91
CMC4P56277 AC116563.2-201ENST00000624751 535 ntBASIC3.11□□□□□ -1.91
CMC4P56277 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.11□□□□□ -1.91
CMC4P56277 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CMC4P56277 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CMC4P56277 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CMC4P56277 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CMC4P56277 ERCC6-202ENST00000374127 1782 ntBASIC3.1□□□□□ -1.91
CMC4P56277 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CMC4P56277 AC007529.1-201ENST00000418574 2178 ntBASIC3.1□□□□□ -1.91
CMC4P56277 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
CMC4P56277 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 RNA5SP388-201ENST00000362584 119 ntBASIC3.1□□□□□ -1.91
CMC4P56277 RN7SKP227-201ENST00000364445 330 ntBASIC3.1□□□□□ -1.91
CMC4P56277 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CMC4P56277 RNU6-317P-201ENST00000384031 107 ntBASIC3.1□□□□□ -1.91
CMC4P56277 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.1□□□□□ -1.91
CMC4P56277 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CMC4P56277 Y_RNA.625-201ENST00000411256 107 ntBASIC3.1□□□□□ -1.91
CMC4P56277 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms