Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC139769.3-201ENST00000618383 175 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 AC015726.3-201ENST00000624501 418 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.58□□□□□ -1.68
LHX1P48742 OR52H1-202ENST00000641796 1061 ntBASIC4.58□□□□□ -1.68
LHX1P48742 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LHX1P48742 AC017007.4-201ENST00000503353 1352 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC096656.1-201ENST00000623826 1364 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AP002784.2-201ENST00000397300 549 ntBASIC4.57□□□□□ -1.68
LHX1P48742 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 TRGV6-201ENST00000417928 299 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AL358176.3-201ENST00000420757 454 ntBASIC4.57□□□□□ -1.68
LHX1P48742 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 RPL23AP38-201ENST00000423801 469 ntBASIC4.57□□□□□ -1.68
LHX1P48742 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.57□□□□□ -1.68
LHX1P48742 RPS6P14-201ENST00000425165 719 ntBASIC4.57□□□□□ -1.68
LHX1P48742 SEC63P1-201ENST00000425785 1258 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 RPL7P29-201ENST00000437151 728 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AL450263.2-201ENST00000439400 589 ntBASIC4.57□□□□□ -1.68
LHX1P48742 MED6P1-201ENST00000439659 713 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.57□□□□□ -1.68
LHX1P48742 AC099063.2-201ENST00000446360 662 ntBASIC4.57□□□□□ -1.68
LHX1P48742 RNU6-1218P-201ENST00000458990 108 ntBASIC4.57□□□□□ -1.68
LHX1P48742 RN7SL41P-201ENST00000476144 297 ntBASIC4.57□□□□□ -1.68
LHX1P48742 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.57□□□□□ -1.68
LHX1P48742 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.57□□□□□ -1.68
LHX1P48742 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.57□□□□□ -1.68
LHX1P48742 RNU6-347P-201ENST00000516658 105 ntBASIC4.57□□□□□ -1.68
LHX1P48742 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.57□□□□□ -1.68
LHX1P48742 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.57□□□□□ -1.68
LHX1P48742 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 AP003717.3-201ENST00000544832 1180 ntBASIC4.57□□□□□ -1.68
LHX1P48742 POLR2KP1-201ENST00000553226 168 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AL109766.1-201ENST00000555080 552 ntBASIC4.57□□□□□ -1.68
LHX1P48742 TVP23BP1-201ENST00000557500 617 ntBASIC4.57□□□□□ -1.68
LHX1P48742 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 AC018645.2-201ENST00000609151 472 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC023043.4-201ENST00000612081 449 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC008759.3-201ENST00000613300 508 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC007546.1-201ENST00000619452 559 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AL138955.1-201ENST00000622881 1040 ntBASIC4.57□□□□□ -1.68
LHX1P48742 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 AC132825.7-201ENST00000638744 335 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC026951.1-201ENST00000559530 2459 ntBASIC4.57□□□□□ -1.68
LHX1P48742 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LHX1P48742 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LHX1P48742 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.57□□□□□ -1.68
LHX1P48742 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LHX1P48742 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX1P48742 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LHX1P48742 AC010329.2-201ENST00000595195 2737 ntBASIC4.56□□□□□ -1.68
LHX1P48742 RNU1-20P-201ENST00000363314 162 ntBASIC4.56□□□□□ -1.68
LHX1P48742 RNU6-354P-201ENST00000383862 107 ntBASIC4.56□□□□□ -1.68
LHX1P48742 RNU6-610P-201ENST00000384264 107 ntBASIC4.56□□□□□ -1.68
LHX1P48742 SNORA70C-201ENST00000384538 135 ntBASIC4.56□□□□□ -1.68
LHX1P48742 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LHX1P48742 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 AL161909.1-201ENST00000397390 712 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AL583835.1-201ENST00000399570 407 ntBASIC4.56□□□□□ -1.68
LHX1P48742 HMGB3P18-201ENST00000406327 590 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AL355143.1-201ENST00000407101 841 ntBASIC4.56□□□□□ -1.68
LHX1P48742 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.56□□□□□ -1.68
LHX1P48742 RNA5SP36-201ENST00000410197 133 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 RBMY1KP-201ENST00000423480 476 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC012519.1-201ENST00000424588 610 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC093422.3-201ENST00000428506 305 ntBASIC4.56□□□□□ -1.68
LHX1P48742 TMX2P1-201ENST00000436507 708 ntBASIC4.56□□□□□ -1.68
LHX1P48742 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 RPL7L1P1-201ENST00000448259 785 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 TPT1P3-201ENST00000492841 512 ntBASIC4.56□□□□□ -1.68
LHX1P48742 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 IGBP1P5-201ENST00000507524 1000 ntBASIC4.56□□□□□ -1.68
LHX1P48742 SNORA31.9-201ENST00000516429 84 ntBASIC4.56□□□□□ -1.68
LHX1P48742 RNA5SP519-201ENST00000516480 119 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 MRPL49P2-201ENST00000521066 465 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.56□□□□□ -1.68
LHX1P48742 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 AC006064.5-201ENST00000541782 248 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms