Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.96□□□□□ -1.78
CXCL12P48061 OR52Y1P-201ENST00000452418 828 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 WBP1LP4-201ENST00000505043 344 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL12P48061 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL12P48061 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CXCL12P48061 AF186190.1-201ENST00000517470 480 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL12P48061 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL12P48061 SNX6P1-201ENST00000601728 1224 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 AL713998.2-201ENST00000604538 1198 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 NF1P10-201ENST00000613227 742 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 AL353726.1-201ENST00000614041 1000 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 MIR7975-201ENST00000619350 68 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CXCL12P48061 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL12P48061 CASC19-284ENST00000642142 1868 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL12P48061 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.96□□□□□ -1.78
CXCL12P48061 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CXCL12P48061 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL12P48061 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL12P48061 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
CXCL12P48061 SCN1A-220ENST00000641603 12506 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CXCL12P48061 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL12P48061 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 U1.1-201ENST00000384101 164 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 AC007068.1-201ENST00000396690 844 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 AC013470.3-201ENST00000420252 1194 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 AP000907.1-201ENST00000428428 510 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 MTND4LP12-201ENST00000448237 295 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 CYCSP35-201ENST00000451978 304 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 RNA5SP103-201ENST00000459503 118 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 APOOP2-201ENST00000461561 539 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 AL358832.1-201ENST00000497800 389 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 HMGN1P15-201ENST00000513870 295 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 RN7SKP18-201ENST00000516005 275 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 SNORD116-30-201ENST00000516468 85 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 RNU4-18P-201ENST00000516751 149 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL12P48061 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 AC133552.5-201ENST00000604266 540 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 AP001002.2-201ENST00000625137 386 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CXCL12P48061 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL12P48061 AC000374.1-201ENST00000434698 1745 ntBASIC3.95□□□□□ -1.78
CXCL12P48061 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL12P48061 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 AC093909.5-201ENST00000621839 1799 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 RNVU1-14-201ENST00000384770 164 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 MIR218-2-201ENST00000385006 110 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC007066.1-201ENST00000392902 381 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 RN7SKP177-201ENST00000410567 355 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 RN7SKP167-201ENST00000411047 285 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 Z92545.1-201ENST00000411782 234 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 PGBD4P8-201ENST00000412993 562 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 AL590609.2-201ENST00000421430 368 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC073335.1-201ENST00000427776 363 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL12P48061 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 PPIAP3-201ENST00000450588 505 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 RAD23BP3-201ENST00000454157 1152 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC007967.1-201ENST00000455422 1159 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 SEPT14P1-201ENST00000458703 648 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL12P48061 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 AC022882.1-201ENST00000532142 501 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC025423.2-201ENST00000537570 439 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.94□□□□□ -1.78
CXCL12P48061 AC090312.1-201ENST00000580637 348 ntBASIC3.94□□□□□ -1.78
CXCL12P48061 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms