Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.51□□□□□ -1.69
SSR1P43307 AL354984.3-201ENST00000604803 325 ntBASIC4.51□□□□□ -1.69
SSR1P43307 XIST_intron.1-201ENST00000619444 68 ntBASIC4.51□□□□□ -1.69
SSR1P43307 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSR1P43307 OR56B2P-202ENST00000641377 2453 ntBASIC4.51□□□□□ -1.69
SSR1P43307 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.51□□□□□ -1.69
SSR1P43307 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 AC087565.3-202ENST00000642085 1603 ntBASIC4.5□□□□□ -1.69
SSR1P43307 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 OR5P1P-201ENST00000299512 925 ntBASIC4.5□□□□□ -1.69
SSR1P43307 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSR1P43307 MTHFD2P2-201ENST00000407725 247 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AL356387.2-201ENST00000422272 243 ntBASIC4.5□□□□□ -1.69
SSR1P43307 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 MTND2P25-201ENST00000449028 610 ntBASIC4.5□□□□□ -1.69
SSR1P43307 CALM1P2-201ENST00000452941 448 ntBASIC4.5□□□□□ -1.69
SSR1P43307 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.5□□□□□ -1.69
SSR1P43307 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.5□□□□□ -1.69
SSR1P43307 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
SSR1P43307 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.5□□□□□ -1.69
SSR1P43307 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.5□□□□□ -1.69
SSR1P43307 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.5□□□□□ -1.69
SSR1P43307 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.5□□□□□ -1.69
SSR1P43307 EIF1AXP2-201ENST00000555940 413 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AC027176.2-201ENST00000559166 746 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AC092868.3-201ENST00000560515 784 ntBASIC4.5□□□□□ -1.69
SSR1P43307 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.5□□□□□ -1.69
SSR1P43307 AC068790.7-201ENST00000602347 528 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AC006254.3-201ENST00000603353 884 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AC115286.1-201ENST00000604298 434 ntBASIC4.5□□□□□ -1.69
SSR1P43307 AC113403.1-201ENST00000604910 193 ntBASIC4.5□□□□□ -1.69
SSR1P43307 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 uc_338.13-201ENST00000618243 179 ntBASIC4.5□□□□□ -1.69
SSR1P43307 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
SSR1P43307 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSR1P43307 NOL8P1-201ENST00000508336 3529 ntBASIC4.49□□□□□ -1.69
SSR1P43307 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSR1P43307 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SSR1P43307 RNU1-89P-201ENST00000384592 164 ntBASIC4.49□□□□□ -1.69
SSR1P43307 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSR1P43307 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.49□□□□□ -1.69
SSR1P43307 AL583835.1-201ENST00000399570 407 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.49□□□□□ -1.69
SSR1P43307 PRELID3BP11-201ENST00000414230 479 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSR1P43307 RPL23AP1-201ENST00000428990 471 ntBASIC4.49□□□□□ -1.69
SSR1P43307 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.49□□□□□ -1.69
SSR1P43307 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.49□□□□□ -1.69
SSR1P43307 RPL23AP52-201ENST00000439311 478 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
SSR1P43307 BUD31P2-201ENST00000449374 300 ntBASIC4.49□□□□□ -1.69
SSR1P43307 NDUFA12P1-201ENST00000455914 406 ntBASIC4.49□□□□□ -1.69
SSR1P43307 HMGN1P8-201ENST00000463578 288 ntBASIC4.49□□□□□ -1.69
SSR1P43307 RPS27AP16-201ENST00000492222 470 ntBASIC4.49□□□□□ -1.69
SSR1P43307 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.49□□□□□ -1.69
SSR1P43307 IFITM8P-201ENST00000522529 394 ntBASIC4.49□□□□□ -1.69
SSR1P43307 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.49□□□□□ -1.69
SSR1P43307 ZNF192P1-203ENST00000565888 810 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.49□□□□□ -1.69
SSR1P43307 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.49□□□□□ -1.69
SSR1P43307 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.49□□□□□ -1.69
SSR1P43307 Z82195.1-201ENST00000604558 398 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AL031666.3-201ENST00000609320 1006 ntBASIC4.49□□□□□ -1.69
SSR1P43307 MIR8058-201ENST00000615737 89 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AC016957.2-201ENST00000616998 848 ntBASIC4.49□□□□□ -1.69
SSR1P43307 AC007546.1-201ENST00000619452 559 ntBASIC4.49□□□□□ -1.69
SSR1P43307 MIR6730-201ENST00000622213 67 ntBASIC4.49□□□□□ -1.69
SSR1P43307 MIR4278-201ENST00000636094 69 ntBASIC4.49□□□□□ -1.69
SSR1P43307 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSR1P43307 AL137100.1-201ENST00000556703 1620 ntBASIC4.49□□□□□ -1.69
SSR1P43307 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.48□□□□□ -1.69
SSR1P43307 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 AL132640.2-201ENST00000559968 1698 ntBASIC4.48□□□□□ -1.69
SSR1P43307 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 RNU6-398P-201ENST00000384143 109 ntBASIC4.48□□□□□ -1.69
SSR1P43307 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 RPS3AP23-201ENST00000401762 784 ntBASIC4.48□□□□□ -1.69
SSR1P43307 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 MTCO3P31-201ENST00000405526 789 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 RBMY2KP-201ENST00000418221 992 ntBASIC4.48□□□□□ -1.69
SSR1P43307 AC114814.2-201ENST00000419195 485 ntBASIC4.48□□□□□ -1.69
SSR1P43307 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSR1P43307 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.48□□□□□ -1.69
SSR1P43307 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.48□□□□□ -1.69
SSR1P43307 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms