Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFC3P40938 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFC3P40938 RNA5SP307-201ENST00000362863 116 ntBASIC3.88□□□□□ -1.79
RFC3P40938 RNU1-44P-201ENST00000384453 163 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC025750.1-201ENST00000399891 379 ntBASIC3.88□□□□□ -1.79
RFC3P40938 RN7SKP167-201ENST00000411047 285 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.88□□□□□ -1.79
RFC3P40938 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 COX6CP15-201ENST00000426313 211 ntBASIC3.88□□□□□ -1.79
RFC3P40938 RPS6P12-201ENST00000432491 726 ntBASIC3.88□□□□□ -1.79
RFC3P40938 BTF3P10-201ENST00000433415 495 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AC122718.1-201ENST00000439448 744 ntBASIC3.88□□□□□ -1.79
RFC3P40938 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AL512326.1-201ENST00000443050 721 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC006326.1-201ENST00000445465 787 ntBASIC3.88□□□□□ -1.79
RFC3P40938 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AC239809.1-201ENST00000450470 217 ntBASIC3.88□□□□□ -1.79
RFC3P40938 FAM133DP-201ENST00000464802 691 ntBASIC3.88□□□□□ -1.79
RFC3P40938 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.88□□□□□ -1.79
RFC3P40938 AC108022.1-201ENST00000493466 478 ntBASIC3.88□□□□□ -1.79
RFC3P40938 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
RFC3P40938 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 AC093824.1-201ENST00000508796 343 ntBASIC3.88□□□□□ -1.79
RFC3P40938 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.88□□□□□ -1.79
RFC3P40938 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 IFITM8P-201ENST00000522529 394 ntBASIC3.88□□□□□ -1.79
RFC3P40938 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.88□□□□□ -1.79
RFC3P40938 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFC3P40938 AC084757.1-201ENST00000559987 490 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC106785.1-201ENST00000565935 262 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.88□□□□□ -1.79
RFC3P40938 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 AP004372.1-201ENST00000604842 844 ntBASIC3.88□□□□□ -1.79
RFC3P40938 MIR6867-201ENST00000610636 67 ntBASIC3.88□□□□□ -1.79
RFC3P40938 AC004825.2-201ENST00000616634 455 ntBASIC3.88□□□□□ -1.79
RFC3P40938 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFC3P40938 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.88□□□□□ -1.79
RFC3P40938 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.88□□□□□ -1.79
RFC3P40938 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFC3P40938 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AC017007.4-201ENST00000503353 1352 ntBASIC3.88□□□□□ -1.79
RFC3P40938 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RFC3P40938 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
RFC3P40938 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.87□□□□□ -1.79
RFC3P40938 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 PNPT1P2-201ENST00000456768 2050 ntBASIC3.87□□□□□ -1.79
RFC3P40938 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFC3P40938 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFC3P40938 RNU6-666P-201ENST00000363499 107 ntBASIC3.87□□□□□ -1.79
RFC3P40938 RNA5SP130-201ENST00000364431 114 ntBASIC3.87□□□□□ -1.79
RFC3P40938 RNA5SP283-201ENST00000365604 119 ntBASIC3.87□□□□□ -1.79
RFC3P40938 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 AMD1P2-201ENST00000412936 992 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AL355994.1-201ENST00000424379 260 ntBASIC3.87□□□□□ -1.79
RFC3P40938 SEC63P1-201ENST00000425785 1258 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 PPIAP17-201ENST00000438507 471 ntBASIC3.87□□□□□ -1.79
RFC3P40938 Z99127.2-201ENST00000441426 334 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AL353898.1-201ENST00000444055 238 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 AL157827.1-201ENST00000447622 132 ntBASIC3.87□□□□□ -1.79
RFC3P40938 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 RPS20P4-201ENST00000461659 355 ntBASIC3.87□□□□□ -1.79
RFC3P40938 RPS29P19-201ENST00000479709 171 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.87□□□□□ -1.79
RFC3P40938 SNORD116-26-201ENST00000516006 96 ntBASIC3.87□□□□□ -1.79
RFC3P40938 SMARCE1P4-201ENST00000523647 241 ntBASIC3.87□□□□□ -1.79
RFC3P40938 DEFB109D-201ENST00000529497 240 ntBASIC3.87□□□□□ -1.79
RFC3P40938 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.87□□□□□ -1.79
RFC3P40938 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.87□□□□□ -1.79
RFC3P40938 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.87□□□□□ -1.79
RFC3P40938 AC020914.4-201ENST00000597690 277 ntBASIC3.87□□□□□ -1.79
RFC3P40938 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.87□□□□□ -1.79
RFC3P40938 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 AC008013.2-202ENST00000637965 364 ntBASIC3.87□□□□□ -1.79
RFC3P40938 MIR492-201ENST00000638676 116 ntBASIC3.87□□□□□ -1.79
RFC3P40938 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFC3P40938 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.87□□□□□ -1.79
RFC3P40938 AC083899.2-201ENST00000423285 1376 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms